Levilactobacillus namurensis: RIN67_07605
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Entry
RIN67_07605 CDS
T09877
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lna
Levilactobacillus namurensis
Pathway
lna03410
Base excision repair
lna03430
Mismatch repair
lna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIN67_07605 (recJ)
03430 Mismatch repair
RIN67_07605 (recJ)
03440 Homologous recombination
RIN67_07605 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lna03400
]
RIN67_07605 (recJ)
DNA repair and recombination proteins [BR:
lna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RIN67_07605 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RIN67_07605 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RIN67_07605 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WNN64577
LinkDB
All DBs
Position
complement(1585030..1587351)
Genome browser
AA seq
773 aa
AA seq
DB search
MIAAQYRWQNKHVDQPTAEAQALAQAASVSPIIAQILTNRGMTTPEAVQAFLTPGPEQLH
DANQLHDMQKGTARIEQAISEEQQITIYGDYDADGVTSTAIMYETLTTLGAKVNYYIPNR
FTDGYGPNVAAFEKLIAAGTQLLVTVDNGVSGNAAIAAANAKGVDVVVTDHHELPQDLPD
AYAIIHPRYPGAEYPFGGLSGAGVAFKVAQALREEIPQDLLDLAAIGTVADLVPLVDENR
VLVYFGLKLLQQDERPGLRALIKAAGIHPEELTEQSIGFGLAPRLNALGRLGDAGPAVDL
LTTLDDDLATQLAQKTEQENRRRQDLVAQISEAALAQATDADHRDRQTLIISGHDWHEGV
LGIVASRIVEQTGKPTLVLNVNADGHAKGSGRSVEAFNLFQALDGHRDLMTAFGGHHMAV
GLTAPADQLGALADALDQEAEAQHLADQGPSELPVAATLAVGDATMDLYHELAQLAPFGT
DNAQPLFAFEPESVTQVKAIGKTGDHLKFQLQAGKARLNAIQFGAGKTATALQTASQVAV
LGTLEDNVWQGRHSLQLMVKDLRTTEPAVVVERTNRLHQAMFTTAGTYLFFHQNIYQQLA
HYLPAGATAILFDGQSLSPVVPETTVFLVDCPDLTSDLTTAVTQLQPAQITAYLYEKESL
SRLGLPTRPQYAKLFKFVATHQHVDVGHQLTQLSTFLQIPRTQLIFMIQVFFECGFVTID
HGIMDGVAQPGHKDLTAAPSYQLRQQQIQTEADLLACPSAELTQRLQGLMDRK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggcacagtaccggtggcagaacaagcacgttgaccaaccaacggcggaggcg
caggcgttggcccaggcggcgtcagtatcgccaattattgcgcagattctaaccaaccgg
gggatgaccacgcccgaggccgttcaagcgttcctaacgccggggcccgagcagttgcac
gacgccaaccagttgcacgatatgcaaaagggtacggcccgtatcgaacaggccatcagt
gaggaacagcagatcacgatttacggtgactacgatgcggatggggtgaccagcacggcc
atcatgtacgagacgttaaccacgttgggcgctaaggtcaactattatattcccaatcgg
tttacggacggttatggccctaacgtcgccgcctttgaaaagctgattgctgcggggacg
caactcctggtgacggtcgataacggggtgtcagggaacgcggcgattgctgcagcgaac
gctaagggcgtggacgtggtcgtgactgaccaccacgagttaccgcaagacttgccggac
gcctacgcgattattcacccccggtaccctggagcggagtatccctttggtgggctttcc
ggggcgggcgtggcctttaaggtggcccaagccttacgcgaagagattccccaagactta
ttggacttagccgcgattggcacggtcgccgacctagtgccgttggtggatgagaaccgt
gtcttggtctacttcggcctcaagctgttgcagcaagacgaacgccccgggttgcgggcg
ttgatcaaagcagccgggattcatccggaagagttgacggaacaatcgattgggttcggg
ttggcgccccgcctcaacgccttaggccgcttgggggatgcgggtcctgccgtggactta
ttgaccacgttagacgacgacttagcgacccaactggcgcagaagacggaacaggagaat
cgtcgccgccaagacctcgtggcccagatcagcgaggcagcgttagctcaggcgaccgac
gccgaccaccgagaccgacagacactcattattagtggacatgactggcacgagggggtc
ctgggaatcgtggcgagtcggattgtggagcagaccggcaagccaaccctggttttgaac
gtgaatgcggatggccacgctaagggttccggtcggagtgtcgaagcctttaaccttttt
caggcgttagacggtcaccgagacctgatgacggctttcgggggtcatcacatggccgtg
ggcttaaccgcaccagccgaccaattaggggccttagcggacgccttagatcaggaggcc
gaggcccagcatttggccgaccaaggtcccagtgaactgccagtggcggccacgttagcc
gtgggcgatgcgaccatggacttgtaccatgaattggcccagttagcgccgtttgggacc
gacaacgcccaacccctgtttgcttttgaaccggagagcgtaacccaggtcaaggcgatc
ggtaagaccggagatcacctgaagttccagttacaggctgggaaggcgcggttgaatgcc
atccagttcggtgccgggaagaccgccacggcattgcaaacggccagccaggtcgctgtt
ctgggaacgttagaggataacgtctggcaagggcggcattcccttcagttaatggtcaaa
gacttacgaactacggaaccggcagtggtggttgaacgaacgaaccggctgcaccaggct
atgttcacgactgccggtacgtaccttttcttccaccaaaacatctatcagcagctggcg
cattacttgcctgcgggcgctacggccatcttgtttgatggtcagagcttgtcgccagtg
gtgcctgagaccaccgtgttcttagtggattgtccggatctgaccagcgacttgaccacg
gccgtgacccagttgcagccggcccagattacggcctatttatacgaaaaggaaagtctt
tcgcgtttggggctgccaactcgaccacaatatgctaaactatttaagttcgttgcgaca
catcaacacgttgacgtgggtcaccaattgacgcaactcagcacgtttcttcagattccg
cgcacccagctgatctttatgattcaagtcttcttcgagtgtgggtttgtgaccatcgac
catggtatcatggatggggtggctcaacccggtcataaagatctcacggcggcgccgagt
taccaactccgccagcagcagattcagaccgaagcggacttgttggcttgcccctcagcg
gaattgactcagcgtctgcagggactcatggatcgaaaataa
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