Levilactobacillus namurensis: RIN67_08120
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Entry
RIN67_08120 CDS
T09877
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lna
Levilactobacillus namurensis
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lna03019
]
RIN67_08120
Messenger RNA biogenesis [BR:
lna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RIN67_08120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WNN64678
LinkDB
All DBs
Position
complement(1694362..1695336)
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AA seq
324 aa
AA seq
DB search
MTTKKQLMDYAVDDAVDLFVLLKSADVRTAKNGKPYIALVFEDRSGEISGKYWDASPADT
EQFVAGQVVHLQGRREKYQTHPQIKITHMRLATPGDGLSAADFIEQAPMTREAMEDYINQ
TIFEITQPTWQRLVRRLLTEFRDQFFTYPAAKSNHHAFKGGLAFHTISILRLAHSVTAQY
PDLNAPLLYAGAILHDLGKTIELSGPEATTYTLAGNLVGHIVLIDGELVRACDPLKLDPQ
AEDVLLLRHMILAHHGLLEYGSPVRPALREAEVLHQLDELDASIMMLDTVVGHTAPGEFS
ERVFALDGRRFYRPNQSGPVTPQE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaagaaacaactgatggactatgcggtcgatgacgcggtggacctgtttgtc
ctcctgaagtcggcggacgtacggactgcgaagaacgggaaaccgtacattgcactggtt
tttgaagaccggtcgggagaaatctccggtaagtattgggacgctagccccgcggatacc
gaacaatttgtcgcgggtcaggtggttcatttgcaggggcggcgagagaagtaccagacg
cacccgcaaatcaagattacccatatgcggttagccacgccgggggatggtctcagtgcg
gccgactttatcgaacaggcaccgatgacccgcgaggccatggaagactacattaaccag
acgatctttgagatcacccaacccacctggcaacgcctggtacgacgtctcctgacggaa
tttcgggaccagttctttacttacccggcggcgaagagtaaccaccacgcgttcaagggg
ggcctagccttccacacgatttccatcttgcggttggcccactcagtcacggcccagtac
ccggacttaaatgcaccgttgttatacgcaggcgcgattctacacgacctgggaaagacg
attgagctgtcggggcccgaagccaccacctacacgctggcggggaacttggtcgggcac
atcgtcttgatcgatggggaactggtacgggcgtgtgacccgttgaaattggatcctcaa
gcggaagatgtgctactcttacggcacatgatcttggcccatcatggcttgctggagtac
ggatcgcccgttcgaccagcattacgggaggccgaggtcttgcaccagctcgatgaactc
gatgcgtccatcatgatgttggataccgtggtcgggcataccgcaccgggtgagttctcg
gaacgggtcttcgctttggatggtcgccgattctaccggccgaaccagtcagggccagta
acgcctcaggaatga
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