Levilactobacillus namurensis: RIN67_10510
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Entry
RIN67_10510 CDS
T09877
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lna
Levilactobacillus namurensis
Pathway
lna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIN67_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lna03019
]
RIN67_10510
03009 Ribosome biogenesis [BR:
lna03009
]
RIN67_10510
Enzymes [BR:
lna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RIN67_10510
Messenger RNA biogenesis [BR:
lna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RIN67_10510
Ribosome biogenesis [BR:
lna03009
]
Prokaryotic type
rRNA helicases
RIN67_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DeaD_dimer
CMS1
NAT10_TcmA_helicase
MS_TIM-barrel
Motif
Other DBs
NCBI-ProteinID:
WNN65106
LinkDB
All DBs
Position
complement(2180403..2181944)
Genome browser
AA seq
513 aa
AA seq
DB search
MKFKELGLSDDLLAAVTDAGYEEATPIQAETIPMVLKGQDVIGQAQTGTGKTAAFALPIL
EKIDKSNPNVQALVISPTRELAIQTQEEIYKLGRHERANVQVVYGGADIRRQIKSLKNHP
QVVVGTPGRLLDHIRRHTLKLDHVQMLVLDEADEMLNMGFLDDIEDIIKQLPEERQTMLF
SATMPPEIKRVGVQFMQDPKHVKIKAKELTTDLIDQFYVRSRDFEKFDIMTRFFDVQDPD
LTIVFTRTKRRVDEISNGLQARGYNAAGIHGDLTQKRRTQIMNEFRHGKLDILVATDVAA
RGIDINDVTHVYNYDIPQDPDSYVHRVGRTGRAGKHGVSMTFVTPNEMGYLREIEKLTKV
RMLPLKPPSAEEAFVGQLGVAKEAVTELVNKTDTEKYASAAKSLLEEYDAEDLVAALLND
VTKDDSSQVPVKITPERPLPKRGGKRHGGGGYHRGGGNRHGNGGGYHHRNNDRRGGSRNG
GRGYEGNRGHRSNNGGRRSEGSGKRGFTIRKKD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttaaagaactgggtctctccgatgacctattagcagctgttactgatgcaggt
tacgaggaagcgaccccaattcaagccgaaaccattccaatggtcttaaagggccaagac
gtgattggtcaagctcagactgggaccggtaagacggccgcctttgcactcccgattctg
gaaaagattgataaaagcaatccgaatgtgcaggcattagtgatctccccaacgcgggaa
ttagcgatccaaacgcaagaagaaatctacaagttaggtcggcacgaacgggctaacgtg
caggtcgtctatggtggggcggatattcgccgtcaaatcaagtccttgaagaaccaccct
caagtggtggtcggtacgcctggtcggttattagaccacatccggcggcacacgctgaag
ttagaccacgttcagatgctggtcttagatgaagcggacgaaatgttgaacatgggcttc
ttggatgacattgaagacatcatcaagcaattgccagaagaacggcaaaccatgctcttc
tccgcaaccatgccacctgaaatcaaacgggtcggtgtgcagttcatgcaagatcctaag
cacgtgaagattaaggccaaggaattgaccacggacttgatcgaccagttctacgttcgt
tcgcgggacttcgagaagttcgatatcatgacgcggttcttcgacgtgcaagaccctgac
ttgaccatcgtcttcacgcggactaagcggcgggtcgatgaaatttcgaacggattacag
gcgcggggttacaacgcggctgggattcatggggacctgacgcagaagcgccggacccag
atcatgaacgaattccgtcacggaaagttggatatcttagtcgcgacggacgtcgctgcc
cgggggatcgacatcaacgatgtgacccacgtgtacaactacgatattccacaagaccct
gacagttacgttcaccgggtcggtcggaccggtcgtgccgggaagcacggggtttccatg
accttcgtgacgccgaacgaaatgggttacttgcgagaaattgaaaagttgaccaaggtg
cggatgctccctctgaagccgccttcggctgaagaagcctttgtcggccaattaggggtt
gctaaggaagccgttaccgaattggtcaacaagacggatactgaaaagtatgcttcagcg
gctaagagcttgctggaagaatacgatgctgaagacttggttgcagcgctcttgaacgac
gtgaccaaggacgacagtagtcaagtaccggttaagatcacgccagagcggccactgcct
aagcgcggtggtaagcgccatggcggtggcggctatcaccgtggtggtggtaaccggcac
ggcaacggtggtggctaccatcaccggaacaacgatcgtcgcggcggcagccgcaatggc
ggtcgcggttacgaaggtaaccggggacaccgtagcaacaacggtggtcggcggtccgaa
ggaagcggcaagcgcggcttcacgattcggaagaaagactag
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