Labrys sp. KNU-23: FZC33_00580
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Entry
FZC33_00580 CDS
T06193
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZC33_00580 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lne03019
]
FZC33_00580 (groL)
03110 Chaperones and folding catalysts [BR:
lne03110
]
FZC33_00580 (groL)
03029 Mitochondrial biogenesis [BR:
lne03029
]
FZC33_00580 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lne04147
]
FZC33_00580 (groL)
Enzymes [BR:
lne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FZC33_00580 (groL)
Messenger RNA biogenesis [BR:
lne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FZC33_00580 (groL)
Chaperones and folding catalysts [BR:
lne03110
]
Heat shock proteins
HSP60 / Chaperonin
FZC33_00580 (groL)
Mitochondrial biogenesis [BR:
lne03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FZC33_00580 (groL)
Exosome [BR:
lne04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FZC33_00580 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FZC33_00580 (groL)
Exosomal proteins of breast cancer cells
FZC33_00580 (groL)
Exosomal proteins of colorectal cancer cells
FZC33_00580 (groL)
Exosomal proteins of bladder cancer cells
FZC33_00580 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QEN84820
LinkDB
All DBs
Position
2:115185..116813
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFHSEAREKMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTSDLAGDGTTTATVLAQAIVKEGAKAVASGINPMDLKRGI
DKAVDAVVGELKANAQKITRNDEIAQVGTISANGDTEIGRFLAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNQEKMRVELEDPYILIHEKKLGNLQALLPVLEAV
VQSGKPLTIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISDDLGIKLENVTLEMLGRAKKVVIEKENTTIVDGAGASKDIDGRIAQIRAQIEETASDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALL
RAAKVLETLAPDNADQKYGIDIVRRAIEAPIRQIAENAGWEGSLIVGKLRETADYAHGWN
AQTGEYGNLFEQGVIDPAKVVRTALQDAASVAGLLVTTEAMVAEKPKQETRSAMPAGGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtcaagttccattccgaagcacgcgagaagatgctgcgtggcgtc
gacattctcgccaatgccgtgaaggtcacgctcggtcccaaggggcgcaatgtcgtgatt
gaaaaatcgttcggcgctcctcgcatcaccaaggacggtgtcaccgtcgccaaggaaatc
gagcttgaggacaagttcgagaacatgggcgcccaaatggtgcgcgaagtcgcctccaag
accagcgatctggctggcgacggcacgactacggccaccgtgcttgcccaagccatcgtg
aaggaaggcgccaaggcggtggcatcgggcatcaatcccatggacctcaagcgcggcatc
gacaaagccgttgatgctgtcgtcggcgaactgaaggccaacgcccagaagatcaccagg
aacgacgagatcgcccaggtcggcacgatttcggccaatggcgacaccgagatcgggcgg
tttctggccgaggccatgcagaaggtcggcaatgagggtgtcatcaccgtggaagaggcc
aagacggccgagactgagctcgaggtcgtggaggggatgcagttcgatcgtggctatctg
tcgccctacttcgtcaccaaccaggagaagatgcgcgtcgaactcgaggatccctacatc
ctgattcacgagaaaaagctgggtaatctccaggccctgttgccggtcctggaagcggtc
gtgcagtcgggcaagcccctgaccatcatcgcggaagatgtggaaggagaggctctggcg
acgctggtggtgaacaagctgcgcggcggcctaaaggttgcggcggtcaaggctccgggc
tttggcgatcgtcgcaaggccatgctcgaggatatcgcaattctcaccggcggtacggtt
atcagtgacgatcttggcatcaagctggagaacgtgacccttgagatgctcggccgcgcc
aagaaggtagtgatcgaaaaggagaacaccaccatcgtcgacggagccggcgccagtaag
gatattgacggccgtattgcccagatcagggcgcagatcgaggagaccgcctccgactac
gatcgcgaaaagctccaggagcgcctggccaagcttgccggcggcgttgcggttattcgt
gtgggcggggccaccgaagtcgaggtcaaggaacgcaaggatcgcgtggacgatgccatg
cacgccacgcgggccgcggtcgaggaaggcatccttccaggcggcggggtagccttgttg
cgagccgccaaggttcttgaaacactggcgcccgacaacgcggaccagaaatacggcatc
gacatcgtgcgccgggccatcgaagcgcccatacggcagatcgccgagaatgctggatgg
gaaggatcactcatcgtcggcaagctgcgggagaccgccgactacgcccatggctggaat
gcccagacaggcgagtatggcaatctcttcgagcaaggcgtgatcgaccctgccaaggtc
gttcgcacagccttgcaagatgcggcctcagttgccggccttctggtaaccactgaggcg
atggtagctgaaaagccgaagcaagagacccggtccgccatgcccgccggtggtggcatg
gacttttga
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