Labrys sp. KNU-23: FZC33_03265
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Entry
FZC33_03265 CDS
T06193
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lne03032
]
FZC33_03265
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_03265
Enzymes [BR:
lne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FZC33_03265
DNA replication proteins [BR:
lne03032
]
Prokaryotic type
DNA Topoisomerases
FZC33_03265
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FZC33_03265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
QEN85280
UniProt:
A0A5C1W9B0
LinkDB
All DBs
Position
2:complement(731178..732179)
Genome browser
AA seq
333 aa
AA seq
DB search
MPRLRIVSPDQLDLRRRRCGRGFSYLDAAGHRITDKTALARFRALAIPPAYSQVRIAADE
QAHIQAIGRDEAGRLQYRYHSEWERRRENRKALNMVRLVRTLPRIRAAIRRDLASPKLDR
NKAIACAIALIDSTHIRVGGAAYARDNGSHGAATLLKRHVTIKAGRVELRFRGKGGKPIH
CMTEDAALARALGRLRTLSGPRLFQFVNADGSRRLIEAGDINAYLRDISGIDVTAKDLRL
LGASKWAVQELAALTPARSVAGRKRQIAAVMRQVSYHLVNTPAVARKSYVPALIVESFKT
GRLQAAFMKARSRGYRRRAEAALHLLATKERSV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccaagattgaggatcgtatcgcccgatcaactcgaccttcgccgtcgccgttgcggg
cgaggattttcatatctcgacgcggcgggccatcgcatcaccgacaagacagccctggct
cggtttcgtgccctggccattccaccggcctattcgcaagtgcgtatcgcagcggacgag
caagcccatatccaggcaatcggccgcgatgaagcggggcggctgcaatatcgctatcat
tccgaatgggaacgccggcgcgaaaaccgcaaggccttgaatatggtgaggctggtgcga
acgcttcccaggatcagggccgctatccgccgcgatctcgcctccccgaagctggatcgg
aacaaggccatcgcctgcgccatcgccctgatcgacagcacgcatatccgagtcgggggc
gccgcctacgcccgggacaatggcagccacggcgccgctaccctgctcaaacggcatgtc
accatcaaggcgggccgggtcgaattgcgttttcgcggcaagggcggcaagcccattcac
tgcatgacggaggatgccgcccttgcccgcgccctcggccgcttgcgcaccttgtcgggg
cctaggctgttccagttcgtgaatgcggacggaagccgccgtctcatcgaggccggcgac
atcaacgcctatctgcgcgacatttccggcatcgacgtcacggccaaggacctgcgcctc
ctgggcgccagcaaatgggccgtccaggaactggccgccctgacgcccgcccgcagcgtg
gccggccggaaacggcagattgccgccgtcatgcggcaagtttcatatcacctcgtcaac
acaccggcggtcgcccgcaaaagctatgtgccggccctgatcgtcgagtccttcaagaca
ggccggctgcaggcagctttcatgaaggcccgctcacgcggctatcgccgccgcgcggag
gcggcgctgcatctcctggcaacgaaagagcggtccgtctga
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