Labrys sp. KNU-23: FZC33_03930
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Entry
FZC33_03930 CDS
T06193
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne00260
Glycine, serine and threonine metabolism
lne00460
Cyanoamino acid metabolism
lne00630
Glyoxylate and dicarboxylate metabolism
lne00670
One carbon pool by folate
lne00680
Methane metabolism
lne01100
Metabolic pathways
lne01110
Biosynthesis of secondary metabolites
lne01120
Microbial metabolism in diverse environments
lne01200
Carbon metabolism
lne01230
Biosynthesis of amino acids
lne01240
Biosynthesis of cofactors
lne04981
Folate transport and metabolism
Module
lne_M00140
C1-unit interconversion, prokaryotes
lne_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FZC33_03930
09102 Energy metabolism
00680 Methane metabolism
FZC33_03930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FZC33_03930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FZC33_03930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FZC33_03930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FZC33_03930
Enzymes [BR:
lne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FZC33_03930
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QEN85404
UniProt:
A0A5C1W7Q4
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All DBs
Position
2:891964..893268
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AA seq
434 aa
AA seq
DB search
MDSPVRPDSTNTGHFFHDTLSKADPAVSGAIGRELHRQREEIELIASENIVSRAVLEAQG
SVLTNKYAEGYPGRRYYGGCQHVDEVEELARERARQMFNCSFANVQPNSGSQANQAVFMA
LMQPGDTFLGLNLAAGGHLTHGAPVNQSGKWFNVVSYGVDPKTHRIDLDQVRDLARTHRP
KVILAGGSAYPRIIDFKAFREIADEIGAKLFVDMAHFAGLVAGGVHPNPLDHAHVVTTTT
HKTLRGPRGGMVLSNDEEIGKKINSAVFPGLQGGPLMHVIAAKAVAFGEALTPEFKTYAA
NVVDNAKALAEGLSSDGVDIVSGGTDTHLMLVDLTRKNLTGKAVEAALGRAHITCNKNGI
PFDPQGPMVTSGVRLGTPACTTRGFTTEEFGEVARMTLKVIDGLATNGEAGNAAVEADVR
EAVQSLLARFPIYD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccgtcagacccgacagcaccaataccggccatttctttcacgataccctg
tccaaggccgatcccgcggttagcggtgccatcggccgcgaactccatcgccagcgcgag
gagatcgagctgatcgcctccgaaaacatcgtctccagggccgtgctggaagcgcagggc
tccgtcctcaccaacaaatatgccgagggctatcccgggcggcgctattacggcggctgc
cagcatgtcgacgaggtcgaggaactcgcccgcgagcgggcgcggcagatgttcaactgc
agctttgccaatgtgcagcccaattcaggcagccaggccaaccaggcggtgttcatggcc
ctgatgcagccgggcgacacctttctgggcctcaaccttgccgcggggggacacctcacc
catggggcgccggtcaaccagtcgggcaagtggttcaacgtggtttcctatggcgtcgac
cccaagacgcaccgcatcgacctcgaccaggtgcgggacctggccaggacgcaccggccg
aaggtgatcctggccggcggctcggcctatccgcgtatcatcgacttcaaggccttccgc
gagatcgccgacgagatcggtgccaagctgttcgtcgacatggcgcattttgccggcctg
gttgccggcggtgtccaccccaacccgctcgatcacgcccatgtggtgaccacgacgacg
cacaagaccctccgcggcccgcgcggcggcatggtgctgtcgaatgacgaggagatcggc
aagaagatcaattcggcagtcttccccggcctgcagggaggtccgctgatgcatgtcatc
gcggccaaggccgtcgccttcggcgaggcgctgacgcccgagttcaagacctatgccgcc
aatgtcgtcgataatgccaaggccttggcggagggcctgtccagcgatggtgtcgacatc
gtgtcgggcggtaccgacactcacttgatgctggtggatctcacccgcaagaacctcaca
ggcaaggcggtggaagccgcgctcgggcgcgcccatattacctgcaacaagaacggtatc
cccttcgatccccaggggccgatggtcacctccggtgtgcgcctgggtacgccggcctgc
acgacacgtggtttcaccacggaggagttcggggaggttgcgcgcatgacgctcaaggtg
atcgatggtctcgccaccaatggcgaagcgggcaatgccgccgtggaagccgacgtgcgc
gaggcagtgcagagcctgctggcccgcttcccgatctatgattga
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