Labrys sp. KNU-23: FZC33_10320
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Entry
FZC33_10320 CDS
T06193
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lne03032
]
FZC33_10320 (topA)
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_10320 (topA)
Enzymes [BR:
lne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FZC33_10320 (topA)
DNA replication proteins [BR:
lne03032
]
Prokaryotic type
DNA Topoisomerases
FZC33_10320 (topA)
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FZC33_10320 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
EH_Signature
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEN86701
UniProt:
A0A5C1WCT0
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Position
1:154755..157409
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AA seq
884 aa
AA seq
DB search
MPVVIVESPAKAQTINKYLGSNYQVIASYGHVRDLPAKDGSVEPDSDFAMVWENDAKASK
RLSDIAKAVKESDKLILATDPDREGEAISWHVLEILRQKRAIKDIPVERVTFNAITKDAV
LKAMKAPREIDEGLVDAYLARRALDYLVGFRLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIERFVAREYWSLIATLATPRGDLFEARLVGADGQKIQRLDVGTEKEALAFRAALDQG
RYVVASVEAKPARRNPFPPFTTSTLQQEASRKLGLSPNRTMQIAQRLYEGVNLNGEQVGL
ITYMRTDGVDMAPEAVTAVRSMIGKSYAPGYLPETPRRYVTKAKNAQEAHEAIRPTDPFR
TPKDVTRFLDNEQARLYELIWKRTVASQMASAELERTTVDILVEAGGRKLDLRATGQVVK
FDGFLTLYNEDRDDDADDEDGKRLPTMSAGEALEKKSIAATQHFTEPPPRYSEATLIKRM
EELGIGRPSTYAATLATLRDRDYVSVDKKRLKAEDKGRLVTAFLESFFARYVEYDFTAAL
EEKLDRISNHELDWKEVLRDFWRDFSAAIDGTKELRTTQVLDALNDLLGPHIFPDRGDGS
NPRQCTVCGTGTLSLKLGKYGSFIGCSNYPECRYTRQLSAGADQNGEAEGGGEAGTRKLG
ADPESGLDVTLRDGRFGPYVQLGEGDKPKRSSLPRGMSAANVDLERALALLSLPKEVAVH
PESGKPILVGIGRYGPYVQHEKTYANLDKDDDVLAVGANRAIALILTKESSGPGRRFGAA
APAGRPLGDYPGGGSVEVKPGRYGAYVTNGKVNATLPKGMEADAVTLEQAIELIAAKGGK
APATKKAAAAKKAPAKKATAAKKPAAKKATKAIVDSDEVPFDTD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtcatcgttgagtcgcctgccaaagcacagacgatcaacaaatatctcggt
tccaactaccaggtgatcgcctcctatggtcacgtgcgcgacctgccggccaaggacggt
tcggtggagcccgactccgacttcgccatggtctgggagaacgacgccaaggccagcaag
cgcctgtcggacatcgccaaggcggtgaaggagagcgacaagctcatcctggcaaccgac
cctgatcgcgagggcgaggcgatctcctggcatgtcctggagatcctgcgccagaaacgc
gccatcaaggatatcccggtcgaacgcgtgaccttcaacgccatcaccaaggacgccgtc
ctgaaggcgatgaaggcgccgcgcgaaatcgacgagggcctggtcgatgcctatctcgcc
cgccgggcgctcgactatctcgtcggcttccgcctgtcgccggtgctctggcgcaagctg
ccgggtgcccgctcggccggtcgcgtccaatcggtcgccttgcgcctggtctgcgatcgg
gagctcgagatcgaacgcttcgttgcgcgcgaatattggtccctgatcgcgaccctggcc
acgccgcgtggcgacctgttcgaagcccgcctcgtcggcgcggacggccagaagatccag
cgtctcgatgtcggcaccgaaaaggaggctctcgccttccgcgcggctctcgaccagggc
cgctatgtcgtggccagtgtcgaggccaaacctgcacggcgcaatcccttcccgcccttc
accacctcgacgctgcagcaggaggccagccgcaagctcggcctgtcgcccaaccgcacc
atgcagatcgcccagcgcctctacgagggtgtgaacctcaatggcgagcaggtcggcctg
atcacctatatgcgtactgacggcgtcgacatggcgccggaggccgtcaccgccgtgcgc
agcatgatcggcaagagctatgcaccgggctacctgccggaaacgccgcgccgctatgtc
accaaggccaagaacgcccaggaagcccatgaggcgatccggccgaccgatcccttccgc
acgcccaaggacgtcacccgtttcctcgacaacgagcaggcccggctctacgaactgatc
tggaagcgcacggttgccagccagatggcgtcggccgagctcgagcgcaccacggtcgac
atcctggtcgaggccggcgggcgcaagctcgacctgcgcgcgaccggccaggtcgtgaag
ttcgacggcttcctgacgctctacaacgaggaccgcgacgacgacgcggatgacgaggac
ggcaagcgccttcccaccatgtcggccggcgaagcgctcgagaagaaatcgatcgccgcc
acccagcatttcaccgagccgccaccgcgctacagcgaggccacgctgatcaagcgcatg
gaggaactcggcatcgggcggccctcgacctatgcggccacgctcgcgaccctgcgcgac
cgcgactatgtctctgtcgacaagaagcgcctgaaggccgaggacaagggccgtctggtc
accgccttcctcgagagcttctttgcccgctatgtcgaatacgacttcaccgcggccctg
gaggagaagctcgaccgcatctccaaccacgagctcgactggaaggaagtcctgcgcgat
ttctggcgcgatttttccgccgccatcgacggcaccaaggaattgcgcaccacccaggtg
ctcgacgcgctcaacgacctgctcggcccgcacatcttccctgatcgcggcgacggctcc
aatccgcgccaatgcacggtgtgcggcaccggcacgctctcgctcaagctcggcaaatac
ggatcgttcatcggctgctccaactatcccgaatgccgctatacgcgccagttgtcggcc
ggcgccgaccagaatggcgaagccgagggcggtggcgaagccggtaccaggaaactcggt
gccgatcccgagagtggtctcgacgtcaccctccgtgacgggcgtttcggcccctatgtc
cagctcggcgagggcgacaagcccaagcgttcgagcctgccacgcggcatgagcgcggcc
aatgtcgacctggaacgggcgctcgcgctgctctccctgcccaaggaagtcgcggttcac
cccgagagcggcaagccgatcctggtgggcattggccgctatggtccctatgttcagcac
gagaagacctacgccaatctcgacaaggatgacgacgtactggccgtcggcgccaatcgg
gccatcgccctgatcctcaccaaggagagctcggggcctggacgccgcttcggcgctgcc
gcgccggcgggccggcctttgggggactatcccggcgggggcagcgtcgaggtcaagcct
ggccgctatggcgcctatgttaccaatggcaaggtcaacgccaccctgcccaagggcatg
gaagcggatgcggtgaccctcgaacaggccatcgagctcattgctgccaagggcggcaag
gcgccggcgaccaagaaggcagcggccgccaaaaaggcaccggccaagaaagccacggcc
gccaagaaacccgctgccaagaaggcaaccaaggcaatcgtcgattccgacgaggtgccg
ttcgataccgattga
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