Labrys sp. KNU-23: FZC33_11125
Help
Entry
FZC33_11125 CDS
T06193
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne03030
DNA replication
lne03430
Mismatch repair
lne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZC33_11125 (dnaE)
03430 Mismatch repair
FZC33_11125 (dnaE)
03440 Homologous recombination
FZC33_11125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lne03032
]
FZC33_11125 (dnaE)
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_11125 (dnaE)
Enzymes [BR:
lne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZC33_11125 (dnaE)
DNA replication proteins [BR:
lne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FZC33_11125 (dnaE)
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FZC33_11125 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
Motif
Other DBs
NCBI-ProteinID:
QEN86843
LinkDB
All DBs
Position
1:complement(330470..333937)
Genome browser
AA seq
1155 aa
AA seq
DB search
MAEAKVNGPGFVHLNVRSAYSLLEGAMKVPKLADLAKADGMPALALTDTNNLFGALEFSE
KLAGSGIQPIMGISLAINFADREDASDRRPLHQRRLPRMILLAQSEVGYGHLMALSSHCY
MDPASGEEAHVSIGRLAEFQEGLIALTGGPAGPLDMALREGIDDLARARLQRLQAMFADR
LYVEVQRHDSAEEQQVEAPLLELAYAADVPLVATNEVYFAARADNEPHDALMAIAEGRIL
AETDRRRMTPNHYFKSRSEMISLFKDLPEAIENTIEIARRCAFRVRTRKPILPRFSTGVD
EMGAPVDEAVELRRQAEEGLKARLAAHGPAPGHTEESYAKRLEFELSIIERMKFPGYFLI
VADFIKHAKGKGIPVGPGRGSGAGSLVAYALTITDLDPLRFSLLFERFLNPERISMPDFD
IDFCQERRDEVIRYVQEKYGEDRVAQIITFGSLQARGVLRDVGRTLEMGYGQVDKLCKLV
PQNPANPVTLAKAIEDEPKLRESAKDDPTVERLLSIAQKLEGLYRHASTHAAGVVIGDRP
LVELVPLYHDPKTSMPMPATQFNMKWVEQAGLVKFDFLGLKTLTVLERALMFLKQRGIDL
DLAGLPLDDKKSYEMLGRGETVGVFQVESAGMRKALLDMNADRFEDIIALVALYRPGPMA
NIPVYNARKKGLEEPDYMLDQLKPALEETYGVIIYQEQVMQIAQILSGYTLGEADMLRRA
MGKKIKSEMDAQRARFVKGAVDGGIQKAKADEIFDYLAKFADYGFNKSHAAAYALVSYQT
AYLKANYPVEFMAASMSLDMSNTDKLAEFRLEARRLGIKVEAPSINRSGPDFEVHGGAIR
YALGAVKGVGLAAMERLVEIRGDQPFFDLGDFARRIDPKAINKRILENLAAAGAFDEFDR
DRARITASIDAIMAQAQRSHAEKSDGQADMFGSASTPEPLKGTVVEPWEPADRLQREFDA
VGFFLSGHPLDAYVTALERLQVPSWAQFTQKVKQGATAGRLAATVLSRSERKTRTGSKMG
VIMLSDASGQFEAVIFSEGLAQYRDLFEPGTAVLVGVQAAHEGDDVRIRIVTAEKLDNAT
AKTQRGIKVFLQGELALESVAKRLGQRGEGEVFLILQLDGGMREVELKLPGKFLVTPQIA
GAIKAIPGVATVMPM
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgaaggtgaacggtccgggcttcgtgcatttgaatgtccgctcggcctat
tccctgctcgagggagcgatgaaggtccccaagctcgccgatctcgccaaggccgacggc
atgccggccctcgcattgacggataccaacaatctgttcggggcgctggagttttccgaa
aagcttgccggtagtggcatccagccgatcatgggcatttcgctggcgatcaatttcgcc
gaccgcgaggatgcctcggaccggcggcctctgcaccagcggcgtttgccgcgcatgatc
ctgcttgctcagagcgaagtgggatatggccacctgatggcgctgtcgtcccattgttac
atggatcccgccagcggcgaggaggcgcatgtttcgatcgggcgcctggccgagttccag
gagggcctgatcgcgctgacgggtggccctgccggtccgctcgatatggctttgcgcgag
gggatcgacgacctcgcgcgggctcggctgcagcgcctgcaggcaatgttcgccgatcgt
ctctatgtcgaagtacagcgtcatgacagcgcggaggagcagcaggtcgaggcgccgctc
ctggaactcgcctatgcggccgacgtgccgctggtggcgaccaacgaggtttattttgct
gcccgggccgataatgagccgcatgatgcgctgatggcaatcgccgaagggcgcatcctg
gctgagacggatcggcggcgaatgacgccgaaccactacttcaagagccggtcggaaatg
atatccttgttcaaggatctcccagaggctattgagaacacgattgaaattgccaggcgt
tgtgcctttcgcgtgcgtacgcgaaagccgatcctgccgcgcttctccacaggggtcgac
gagatgggcgctcccgtcgacgaggccgtggagttacgccgccaggccgaggaaggcctc
aaggcccggctggccgcgcatgggccggctcccggccataccgaggaaagctacgccaag
cggctggaattcgagctttcgatcatcgagcgcatgaagttccccggctacttcctgatc
gtggcggacttcatcaagcatgccaagggaaagggcatcccagtcgggccagggcgtgga
tcgggcgcaggctccctggttgcctatgcactgacgatcaccgatctcgatccgctgcgc
ttcagcctgctgttcgagcgcttcctcaatcccgaacgtatctcgatgccggacttcgac
atcgacttctgccaggagcggcgcgacgaagtcatccgctatgtgcaggagaagtatggg
gaggatcgtgttgcccagatcatcaccttcggctccctgcaggcgcgcggcgtgctgcgc
gacgtcgggcgcacgttggagatgggatatggccaggtcgacaagctgtgcaagctggta
ccgcagaacccggccaatccggtaacgctggccaaggcgatcgaggatgagccgaagctt
cgcgaatccgccaaggacgatcccactgtcgagcgcctgctcagcatcgcccagaagctg
gaggggctctatcgtcacgcctcgacccatgccgccggcgtggtgataggggatcgtccg
ctggtggagctggtgccgctctatcacgatccgaagacctcgatgccgatgccggctacc
cagttcaacatgaaatgggtggagcaggcgggcctggtgaagttcgacttcctcggtctc
aagacgctcaccgtgctggaacgcgccttgatgttcctcaagcagcgcggcatcgatctc
gatctcgccggcctgccgctcgacgacaagaagagctacgagatgctcggccgcggcgag
acagtgggcgtgttccaggtggaaagtgcgggcatgcgcaaggcactgctcgacatgaac
gccgaccgtttcgaggatatcatcgccctggtggcgctctaccgtccaggcccgatggcc
aatattccggtctacaacgcccgaaagaaggggctggaagagccggactatatgctcgat
cagctcaagccggccctggaggagacgtatggcgtcatcatctaccaggaacaggtgatg
cagatcgcgcagattctctccggctatacgctgggtgaggccgatatgctgcgccgcgcc
atgggcaagaagatcaagtcggagatggacgcccagcgtgcccgcttcgtcaaaggtgcc
gtcgacgggggcattcagaaggccaaagccgacgagatctttgattatctcgccaagttc
gccgattacggcttcaacaagagccatgcggcagcctatgcgctggtctcctaccagacc
gcctatctcaaggcgaattatccggtcgagttcatggcggcgtcgatgtcgctggatatg
tcgaacaccgacaagctcgccgaattccgcctggaggcgcgtcggctcggcatcaaggtc
gaggcgccctccatcaaccgctctggacctgacttcgaggtccatggcggtgcgatccgc
tatgcgctcggcgcggtcaagggggtcggcctggcggcaatggagcgcctggtcgagatc
cgtggcgaccaacccttcttcgacctcggtgattttgcccggcgcatcgatcccaaggcg
atcaacaagcgcattctcgaaaatctggcggcggcgggagccttcgacgagttcgaccgc
gatcgggcgcgcatcaccgcctccatcgacgccatcatggcgcaggcgcagcgctcccac
gccgagaagagcgatggacaggccgacatgttcggctccgcttcgacacccgaaccgctg
aaagggacggtcgtcgagccttgggagcctgccgaccgtctgcaacgcgagttcgacgct
gttggcttctttctttcgggccatcccctcgacgcctatgtcaccgccttggagcgcctg
caggtgccgtcctgggcacagttcacccagaaggtgaagcagggcgccacggcagggcgc
ttggcggcgaccgtgttgtcgcgttccgagcgcaagacccggaccggctccaagatgggc
gtgatcatgctttcggatgcttcgggccagttcgaggccgtgatcttctcggaagggctg
gcgcaatatcgtgacctgttcgagccgggcacggccgtgctggtcggcgtgcaggccgct
catgaaggagacgatgtccgcatccgcatcgtgacggcggaaaagctcgacaacgccacc
gccaagacccagcgcggcatcaaggtcttcctgcaaggcgagctggcccttgaatccgtc
gccaagcgattgggccaacgcggcgagggggaggtcttcctgatcctgcaactggacggc
ggtatgcgggaggtcgagctgaagctgcctggcaaattcctggtgacgccgcagatcgcc
ggcgcgatcaaggcgattccgggcgtggcgaccgtcatgccgatgtga
DBGET
integrated database retrieval system
