Labrys sp. KNU-23: FZC33_14365
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Entry
FZC33_14365 CDS
T06193
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lne03009
]
FZC33_14365
Enzymes [BR:
lne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FZC33_14365
Ribosome biogenesis [BR:
lne03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FZC33_14365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QEN91128
UniProt:
A0A5C1WQA3
LinkDB
All DBs
Position
1:complement(1013320..1014522)
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AA seq
400 aa
AA seq
DB search
MELKIERLGHRGDGIAPGPVFVPYALPGETVLTEVIGERGRLIALQEPSPDRIQAFCPHF
THCGGCAIQHWSLQAYQAWKRGLVVEALRQAGIEAPVEPLVDAHGRGRRRATLHARKGKV
GFAEARSHAIVELDACPILVPELNRGLEAVRALEKQLRGLGKPLDLVLTATVTGLDCDIR
GAGRIDDKTRLKLGDLAQQFDLARLSNHGDVVIERRAPVVRFGTVEVSPPPGAFLQATAE
ADIVLTALVRAGLSGAKRVADLFSGCGTFALALADAMHVQAFDSDKPAIGALDRAARRAQ
GLKPVGATARDLFHRPLLAEELKPFDAVVFDPPRAGAEAQAKRLAAAKLRRIVGVSCNPT
TFARDAALLIAGGYRLVKVTPVDQFRHSGHVELVGVFERR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ctggaactcaagatcgaacggctggggcatcgcggtgacggcatcgcgccgggcccggtc
ttcgttccctatgccttgccgggcgagacggtcctgaccgaggtgatcggtgagaggggg
cggctgattgccctgcaggagccgagcccggatcgcatccaggctttctgcccccatttc
acccattgcggcggttgcgccatccagcactggtcgctccaggcctatcaggcctggaag
cgcggcctggtcgtcgaggcgttgaggcaagcgggcatcgaggcgccggtcgagccgctc
gtcgatgcccatggccgaggtcggcgccgggcgaccctgcatgcccgcaagggcaaggtc
ggcttcgccgaggcgcgttcgcatgccatcgtcgaactcgacgcctgtccgatcctggtg
ccggagctgaatcgcggcctggaggcggtgcgtgcgctggagaagcaattgcgcggcctc
ggcaagccgctcgacctggtgctgaccgccacggtcacgggcctggactgcgacattcgc
ggcgccgggcgcatcgacgacaagacgcggctgaagctcggcgacctcgcccagcagttc
gacctggccaggctttccaatcacggcgacgtggtgatcgaacgccgggcgccggtggtg
cggttcggaacggtggaggtttcgccgccgccgggggccttcctgcaagccacggctgag
gcagatatcgtccttacggccctggtgcgcgcgggcctttccggcgccaagcgcgttgcc
gaccttttctccggctgcggtaccttcgctttggcgctggcggacgccatgcatgtgcag
gccttcgattccgacaagccggcaattggcgcgctcgaccgcgctgcccggcgagcccag
gggctgaagcctgtcggcgctaccgcgcgcgatctcttccatcggccgctgctggccgag
gaactcaagcccttcgacgccgtggtgttcgatcccccgcgtgccggtgccgaggcgcag
gccaaacgccttgccgctgccaagctgcgccgtatcgtcggtgtttcctgcaacccgacg
accttcgcccgcgacgccgcactgttgattgccggtggctaccggctcgtcaaggtgacg
ccggtcgatcagttccgccattccggccatgtcgaactggtcggcgtgttcgagcgaaga
tag
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