Labrys sp. KNU-23: FZC33_16345
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Entry
FZC33_16345 CDS
T06193
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lne
Labrys sp. KNU-23
Pathway
lne02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FZC33_16345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lne02000
]
FZC33_16345
Transporters [BR:
lne02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FZC33_16345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QEN87789
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All DBs
Position
1:complement(1436058..1437161)
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AA seq
367 aa
AA seq
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MSRKTWLGIASVSVLALAASMGSAFAQSQELIDAAKKEGQLTTIALPHDWCGYGAIIEGF
KAKYGLKVNELNPDAGSGDEVEAIKANKGNTGPQAPDVIDVGLSFGPTSKKDGLIQPYKV
ATWDSIPDNAKDADGHWYGDYYGVLAFEVNKDIVKNSPKDWSDLLSSDYANAVALAGDPR
TANQAIQGVYAAGLSAAKGDASKAAAEGLKFFAELNKKGNFVPTIGKAASLAQGATPIVL
RWDYNALTDRDTLKGNPDVDVVIPASGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ
IGYLKGYCHPIRFNDLVAKKKIPADLLAKLPPAEAYAKAVFPTLDEQGAAKAEITKDWDS
VVGAAVK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggaaaacgtggctgggtatcgcatcggtatccgtgctggctttggcggcttcg
atgggcagtgcgtttgcccagagccaggagctgatcgacgccgccaagaaggaaggccag
ctcaccacgatcgcgctgccgcatgactggtgcggctacggcgccatcatcgagggcttc
aaggccaagtatggcctcaaggtcaacgagctcaatccggacgccggctcgggcgacgag
gtcgaggccatcaaggccaacaagggcaataccggtccccaggctcccgatgtgatcgat
gtcggcctttccttcggcccgacctccaagaaggacggcctgatccagccctacaaggtg
gcgacctgggatagcattcccgacaacgccaaggatgccgatggccattggtacggcgat
tattacggcgtgctcgccttcgaggtgaacaaggacatcgtcaagaattcgcccaaggat
tggagcgacttgctgagctccgactatgccaatgccgtggcgctggccggtgatccccgt
acggccaaccaggcgatccagggcgtctatgccgccggcctgtccgccgccaagggcgac
gccagcaaggctgcagccgagggcctgaaattcttcgccgagctgaacaagaagggcaat
ttcgtgcccaccatcggcaaggccgcctcacttgcccagggcgcgaccccgatcgtcctg
cgctgggactacaacgccctcaccgatcgcgacacgctcaagggcaatccggacgtcgac
gtggtcatccccgccagcggtgtggttgccggcgtctatgtccaggccatcagcgcctat
gcgccccatcccaacgccgccaagctgtggatggagtatctttattccgacgagggccag
atcggttatctgaagggctattgccacccgatccgcttcaacgacctcgtcgccaagaag
aagataccggccgacctgctcgccaagctcccgccggccgaagcctatgccaaggccgtg
ttcccgacgcttgatgagcagggcgccgccaaggccgagatcaccaaggattgggacagc
gtggtcggcgccgccgtcaagtaa
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