Labrys sp. KNU-23: FZC33_16365
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Entry
FZC33_16365 CDS
T06193
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lne03021
]
FZC33_16365 (rpoH)
Transcription machinery [BR:
lne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FZC33_16365 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
PF0610-like_N
HTH_11
Sigma70_r4_2
GntR
HTH_3
KORA
Motif
Other DBs
NCBI-ProteinID:
QEN87793
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All DBs
Position
1:complement(1441508..1442395)
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AA seq
295 aa
AA seq
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MASAALPVLATESGLSRYLDEIRRFPMLQPEQEYMLAKRWREHGDREAAHQLVTSHLRLV
AKIAMGYRGYGLPLGEVVSEGNIGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSW
SLVKMGTTANQKKLFFNLRKAKSQISALDEGDLRPDQVKSIAKSLGVQEQEVVEMNRRLG
GDASLNAPVREEGDGEWQDWLVDDTANQETRLAETEQSENRSTALRQALNVLNDRERRIF
EARRLADDPITLEELSDEFGVSRERVRQIEVRAFEKIQAAVRSGVARLEAAHAPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccgcgcttcccgttttggccaccgagagtggcctgtcgcgttatctcgat
gaaattcgccgcttcccgatgctccagccggagcaggaatacatgcttgccaagcgttgg
cgcgagcatggcgatcgcgaagccgcacatcaattggtgacctcgcatctgcggctcgtg
gccaagatcgccatgggctatcgtggctatggcctgccgctgggcgaagtggtttccgaa
ggcaatatcggcctgatgcaggccgtcaagcgtttcgagcccgaaaaaggctttcgcctt
gctacttacgccatgtggtggatccgcgcctcgatccaggagtatatcctgcgttcctgg
tcgctggtgaagatgggcacgaccgccaaccagaagaagcttttcttcaacctgcgcaag
gccaagagccagatttcggcgctggatgaaggcgatctgcgccccgatcaggtcaagtcc
atcgccaagtcgctcggcgtgcaggagcaggaggtggtggagatgaaccgccgtctcggc
ggcgacgcgtcactcaatgctccggtgcgtgaggaaggtgacggcgaatggcaggactgg
ctggtggatgataccgccaaccaggaaactcgcctcgccgaaacggagcaaagcgagaat
cgctccaccgccttgcgccaggccctgaacgtgctgaatgatcgtgagcggcgcatcttc
gaggcacgccgcctcgccgatgatcccatcacgcttgaggagctctccgacgagttcggt
gtctcgcgcgagcgtgtgcgccagatcgaggtcagggccttcgagaagatccaggcggcg
gtgcgctccggcgtggcccgtctggaagcggcacacgcgccggcttga
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