Labrys sp. KNU-23: FZC33_16480
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Entry
FZC33_16480 CDS
T06193
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lne
Labrys sp. KNU-23
Pathway
lne02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FZC33_16480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lne02000
]
FZC33_16480
Transporters [BR:
lne02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FZC33_16480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
TOBE
AAA_16
AAA
Mg_chelatase
RsgA_GTPase
AAA_28
AAA_25
ORC-CDC6-like
AAA_29
Rad17
ATP-synt_ab
AAA_22
SbcC_Walker_B
NACHT
nSTAND_NTPase5
AAA_14
AAA_18
AAA_23
AAA_5
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QEN87815
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All DBs
Position
1:complement(1462587..1463678)
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AA seq
363 aa
AA seq
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MANSVEFINAVKHFGDVTAVDGVSFSIAGGETVALLGPSGCGKTTILRIIAGFERPDSGV
VRIAGEDVTRLRPYQRNVGLLFQHYALFPHMTIAENVAYGLRYRGCPRNEIDDRVAQMLE
LVRLPDFGHRKPHQLSGGQQQRVALARALATRPGLVLLDEPLSALDAKLRQELRAELKQV
LAAVDATTIVVTHDQEEAMSLGERVFVMKSGTIVQAGPPNEVYGQPRSRFVAEFMGRANW
FRGRLEAHGNGLAAFVGANGMKLVVSTFDDATGRGEVDLCVRPESIDLMPLQAAATSGER
NRIPGQVLEVTPLGAMRQILVELQGGGQVLAVQPNRSGEAHGPGQPVIVGLPAEGCVVVP
VAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactccgtggaattcatcaatgccgtcaagcattttggcgatgtgacggcggtc
gacggcgtttccttctcgatcgccggtggcgagaccgtcgccctgctcggcccgagcggc
tgcggcaagaccaccatcctgcgcatcatcgccggtttcgaacgacccgattccggcgtg
gtgcgcatcgccggcgaggacgtcacccggctccggccctatcagcgcaatgtcggcctc
ctgttccagcactatgcgctgttcccgcacatgaccatcgccgagaacgtcgcctatggg
ctgcgctaccggggctgcccgcgcaacgagatcgacgaccgcgtcgcccagatgctggag
ctggtgcgcctgccggatttcggccatcgcaagccccatcagctttcaggcggccagcag
cagcgcgtcgccctggcccgcgccctggccacgcgccccggcctggtcctgctcgacgag
ccgctctccgccctcgacgccaagctgcgccaggaattgcgggccgagctcaagcaggtg
ctcgccgccgtcgacgccactaccatcgtggtcacccatgaccaggaggaggcgatgagc
ctgggcgaacgggtcttcgtgatgaaaagcggcacgatcgtgcaggccgggccgcctaac
gaggtctatggccagccgcgctcgcgcttcgtggccgagttcatgggccgggccaactgg
ttccgcggccgcctggaagcccatggcaacgggcttgccgcctttgtcggcgccaatggc
atgaagctggtggtctccaccttcgacgatgccaccgggcgcggggaggtggatctgtgc
gtgcggcccgaaagcatcgacctgatgccgttgcaggccgcagccacttccggtgagcgc
aaccgcattcccggccaggtgctggaggtgacgccgctcggtgccatgcggcagatcctc
gtcgaactgcagggcggcgggcaggtgcttgccgtccagcccaaccgcagtggcgaggcg
cacggccccgggcagcctgtgatcgtcggcctgccggcggagggctgcgtggtcgtgccg
gtcgccgcctga
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