Labrys sp. KNU-23: FZC33_17030
Help
Entry
FZC33_17030 CDS
T06193
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne00521
Streptomycin biosynthesis
lne00523
Polyketide sugar unit biosynthesis
lne00525
Acarbose and validamycin biosynthesis
lne00541
Biosynthesis of various nucleotide sugars
lne01100
Metabolic pathways
lne01110
Biosynthesis of secondary metabolites
lne01250
Biosynthesis of nucleotide sugars
Module
lne_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FZC33_17030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FZC33_17030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FZC33_17030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FZC33_17030 (rfbB)
00525 Acarbose and validamycin biosynthesis
FZC33_17030 (rfbB)
Enzymes [BR:
lne01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FZC33_17030 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
DUF4170
Motif
Other DBs
NCBI-ProteinID:
QEN91180
UniProt:
A0A5C1WR31
LinkDB
All DBs
Position
1:complement(1596383..1597435)
Genome browser
AA seq
350 aa
AA seq
DB search
MRVLVTGGAGFIGSAVVRLLADEGDVEVLNFDKLTYAGNPHSLRSISGSRNYRFVRGDIT
DRLKLDAVMASFRPNAVMHLAAESHVDRSIAGADDFIQTNIVGTYTLLEAARAYWRTLSG
RERDAFRFLHVSTDEVYGSLGSDGLFTETTRYDPSSPYSASKAASDHLARAWMRTYGLPV
LISNCSNNYGPYHFPEKLIPLVILNALEGRTLPVYGDGSNVRDWLFVEDHARALWTIVRT
GRPGETYNVGGRSERSNLGVVETICDVLDGLVGGSRPRRDLIAFVPDRPGHDQRYAIDAG
KLEADLGWRARETFESGIRRTVQWYLDNDWWWRPIRSGVYAGERLGLVSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttctggtgacaggcggtgcaggcttcatcggttcggccgtggtgcgcctgctg
gcggacgagggggatgtcgaggtgctcaacttcgacaagctcacttatgcgggcaatcct
cattcgctgcgttcgatatccggctcgcgaaactatcgtttcgtgcgtggcgatatcacc
gacaggctgaagctggatgccgtcatggcgtctttccgcccaaacgcggtgatgcatctg
gccgccgagagtcatgtcgatcgctcgattgccggagccgatgacttcatccagaccaat
atcgtggggacctataccctgctggaagccgctcgtgcctattggcgcacgctttcgggc
cgcgagcgcgacgcgttccgcttcctgcatgtctccaccgacgaggtctatggctcgctc
ggcagcgacggcctcttcaccgagaccacgcgctatgatccgagctcgccttattcggcc
agcaaggcggcgtccgaccaccttgcccgggcctggatgcgcacctatggcctaccggtg
ctgatctccaactgctcgaacaattacggtccgtatcattttcccgaaaagcttattccg
ctggtcatcctgaatgcattggaggggcgcaccctgccggtctatggcgatggcagcaat
gtgcgtgactggcttttcgtggaggatcacgcccgcgctttgtggacgatcgtacggacg
ggccgccccggggagacctataatgtcggcggacgcagcgagcgcagcaatctgggggtc
gtcgaaaccatttgcgacgttctggacgggcttgtcggcggctcgcggccgcggcgggac
ctgatcgccttcgtgcccgaccgcccgggccatgaccagcgctacgccatcgatgccggc
aagctcgaggcggatctgggctggcgagcccgcgagaccttcgaatccggcattcgccgt
acggtgcagtggtatctcgacaatgattggtggtggcgcccgatccgctcgggggtctat
gccggcgaacggctggggctcgtcagcgcctga
DBGET
integrated database retrieval system