Labrys sp. KNU-23: FZC33_21685
Help
Entry
FZC33_21685 CDS
T06193
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne00300
Lysine biosynthesis
lne00470
D-Amino acid metabolism
lne01100
Metabolic pathways
lne01110
Biosynthesis of secondary metabolites
lne01120
Microbial metabolism in diverse environments
lne01230
Biosynthesis of amino acids
Module
lne_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FZC33_21685 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FZC33_21685 (dapF)
Enzymes [BR:
lne01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FZC33_21685 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QEN88751
LinkDB
All DBs
Position
1:2641406..2642281
Genome browser
AA seq
291 aa
AA seq
DB search
MLLSDYLAQAVPPGLEGLKPFVKMHGLRNHFVIFDQRLHPRALPVPDIVRLCDVETGVGA
EQVLTIEAPTSAGAAGGSYARMRIFNIDGREAGACGNATRCVAHLLLEESGRDELVLETG
GGLLACRRAGPMAVAVTLGPIVMGWDQIPLAHEADTAHLPLASGPLRDGLALNIGNPHAV
FFVGELDAVDVRAVAPAIQNDPLFAEGVNVGVAEVLDRGTLRLKVWERPGILTQACGTGA
CVAAYAARLRGLIDGNSVAVHLPGGALSIELLPDGRAIMTGPVAVCCLGYA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccgattacctcgcccaagcggtgccgcctggccttgaggggctgaaaccc
ttcgtcaagatgcacggcctcaggaaccacttcgtgatcttcgaccagcgcttgcatccc
cgtgccttgccagtgcccgatatcgtgcgcctgtgcgacgtcgagacgggagtcggcgcc
gaacaggtgctcaccatcgaagcgccgacatccgctggggccgccggcgggagctatgcc
cgcatgcgcattttcaacatcgacgggcgtgaggcgggggcttgcggcaatgccacgcgt
tgcgtcgcccatctcctgctggaggaaagcgggcgggacgaactggtgctggaaacgggc
gggggtctgctggcctgccgccgggccggcccgatggctgttgcggtgacgctcgggccg
atcgtgatgggatgggaccagatcccgctcgcgcatgaggccgataccgcccatctgccg
ctcgccagcggcccgcttcgcgatggcctcgccctgaatatcggcaatccgcacgcagtg
ttcttcgttggggaactcgatgccgtcgacgtcagggcggtggcaccagccatccagaac
gatccgctgttcgcggagggcgtcaatgtcggcgtggccgaggtgctcgatcgcggcacg
ctgcgcctcaaggtctgggagcggccaggcatcctgacgcaggcctgcggcaccggcgct
tgtgtcgctgcctatgctgcccgcctgcgtgggctgatcgacggcaacagcgtcgccgtg
catctgccgggcggggcgctgtccatcgaactgctgccggatggccgcgcgatcatgacc
gggccggtggcggtgtgctgcctcggctatgcctga
DBGET
integrated database retrieval system