Labrys sp. KNU-23: FZC33_22585
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Entry
FZC33_22585 CDS
T06193
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne03030
DNA replication
lne03410
Base excision repair
lne03420
Nucleotide excision repair
lne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZC33_22585 (polA)
03410 Base excision repair
FZC33_22585 (polA)
03420 Nucleotide excision repair
FZC33_22585 (polA)
03440 Homologous recombination
FZC33_22585 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lne03032
]
FZC33_22585 (polA)
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_22585 (polA)
Enzymes [BR:
lne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZC33_22585 (polA)
DNA replication proteins [BR:
lne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FZC33_22585 (polA)
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FZC33_22585 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZC33_22585 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QEN88920
UniProt:
A0A5C1WK61
LinkDB
All DBs
Position
1:complement(2845305..2848289)
Genome browser
AA seq
994 aa
AA seq
DB search
MTPAPRPPGKGDHVFLVDGSSFIFRAYFQSINQDARYNYRSDRLPTGAVRLFCNVLHKMI
KEGVMGKQPTHLGIIFDKSEDSFRKEIYPPYKGHRPPPPEELVPQFPLMRVAVRAFGLKP
VEQSRYEADDLIATYCDIAVKAGADVTIVSADKDLMQLIQPGVVMFDPASGDQKAKGSRP
ERLIAEPEVLEKFGVTPDKVVDVQALAGDSTDNVPGVPGIGVKTAAQLINEYGDLEGLLA
RAGEIKQPKRRESLTDPENVKLARISRELVKLVTDVTLETPIEDLIAPGLDAKGAIAFLK
AMEFSTLTRRIAEDAGLDVADIAADEALKIPDSDFSPAPARTPAPKPGADGVSPAPAVAT
GAGTPSAVVESVKARLTAIPFEAGSYETVATLEALDGWISRARELGYVAFDTETTSLDAL
QADLVGFSLSVEPGKACYVPLRHRDKADLFGGGMMAGQVDVSEALKRLKGLLEDPGVLKI
GQNLKYDTLVMGEENVKVAPYDDTMLMSYVVDGGRGNHGMDELSVRHFGHKPIAFSEVCG
SGKSLIGFDQVTIERATAYAAEDADVTLRLWLLLKARLVAEGLVTIYETLERPLVAVLAK
MESRGIMIDRQILARLSGEFAQSAARLEAEIHELAGENFNVGSPKQLGDILFGKMGLPGG
KKTPTGQWATSAQILEDLADQGLELPRRIVAWRQLTKLKSTYTDALPTYVNPKSGRVHTS
YSLAATTTGRLSSSEPNLQNIPVRTEEGRKIRSAFIAAPGAKLISADYSQIELRVLAHVA
EIPQLTKAFEDGVDIHAMTASEMFGVPVQGMDPLVRRRAKAINFGIIYGISAFGLANQLS
IPREEASAYIKKYFERFPGIRDYMDRMKAECRANGYVETVFGRKMHFPAIESKNPSERAF
VERQSINAPIQGSASDVIRRAMSRMDAALLKAGLSAKMLLQVHDELVFEAPEEEVEATLP
VVSQVMEHAALPALQLKVPLQVEARAASNWEEAH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgctccgcgcccccccggaaagggcgaccacgtcttcctggtcgacggctca
tccttcatcttccgggcctatttccagtcgatcaaccaggacgcccgctacaattaccgc
tccgaccgcctgccgacgggggcggtgcgcctgttctgcaacgtgctgcacaagatgatc
aaggaaggggtgatgggcaagcagcccacccatctcggcatcatcttcgacaagtcggaa
gactccttccgcaaggagatctacccgccctataagggccaccgtcccccgcccccggaa
gagctggtgccgcaattcccgctgatgcgggttgccgtacgcgccttcggcctgaaaccg
gtggaacagtcccgctacgaggccgatgatctgatcgccacctattgcgacatcgccgtc
aaggccggcgccgacgtgaccatcgtctcggccgacaaggatttgatgcagctcatccag
cccggcgtggtgatgttcgatccggcttccggcgaccagaaggccaagggctcgcgtccc
gagcgcctgatcgccgagcccgaggtgctggagaagttcggcgtgacgcccgacaaggtg
gtggatgtgcaggccctggccggcgattccaccgacaatgtccccggcgtgcccggcatc
ggcgtcaagacggcggcgcagctcatcaacgaatatggcgacctggaagggctcctcgcc
cgcgcgggcgagatcaagcagcccaagcgccgcgagagcctgaccgaccccgaaaacgtc
aagctcgcccgcatctcgcgcgaactggtgaagctcgtcaccgacgtcaccctggagacg
ccgatcgaggacctgatcgcccccgggctcgacgccaagggcgccatcgccttcctgaag
gcgatggagttctccaccctgacccgccgcatcgccgaggatgccggcctcgacgtcgcc
gatatcgcggccgacgaggcgctgaagatccccgacagcgatttctcgcccgccccggcc
cggacgccggcgcccaagccgggcgcggacggcgtctctcccgctcctgcggttgccacg
ggggccggcacgccctccgccgtggtggaaagcgtcaaggccaggctcaccgccattccc
ttcgaggccggctcctacgagaccgtcgccaccctggaagcgctcgacggctggatcagc
agggcccgcgaactcggctatgtcgccttcgacaccgagaccacctcgctcgacgcgctg
caggccgatctcgtcggcttctccctgtcggtcgagccaggcaaggcctgctatgtgccc
ctgcgccatcgcgacaaggcggacctgttcggcggcggcatgatggccgggcaggtcgac
gtgtcggaggcgctgaagcggctgaagggcctgctcgaagatcccggcgtgctgaagatc
ggccagaatctcaaatatgacacgctggtgatgggcgaggagaacgtcaaggtcgcgccc
tatgacgacaccatgctgatgtcctatgtcgtcgatggcgggcgcggcaatcacggcatg
gacgagttgtccgtgcgccatttcggccataagccgatcgctttttccgaagtctgcggc
tccggcaagtcgctgatcggcttcgaccaggtcaccatcgagcgcgctaccgcctatgcc
gccgaggatgccgacgtcaccctgcggctgtggctgctgctcaaggcccgcctggtcgcc
gaaggcctggtcaccatctacgagacgctggagcgtccgctcgtcgccgtgctcgccaag
atggaatcgcgcggcatcatgatcgaccgccagatcctggcacgcctgtcgggcgaattc
gcccagagcgccgcccggctcgaggccgagatccacgagcttgccggcgagaacttcaat
gtcggctcgcccaagcagctcggcgacattctgttcggcaagatgggtctgcccggcggc
aagaagacccccaccggccaatgggcgacctcggcccagatcctggaggacctggccgac
cagggcctggaactgccgcgacgcatcgtggcctggcgccagctcaccaagctcaaatcg
acctataccgacgccctgcccacttatgtgaacccgaagtcgggccgggtccacacctcc
tactccctggcggcgaccaccaccggacgcctgtcctcctccgagcccaacctgcagaac
attccggtgcgcaccgaggaagggcgcaagatccgctcggccttcatcgcagcgcccggc
gccaagctgatctcggccgactattcgcagatcgagctgcgcgtactcgcccatgtcgcc
gagatcccgcagttgaccaaggccttcgaggacggcgtcgacatccacgccatgaccgct
tcggagatgttcggcgtgccggtgcagggcatggatccgctggtgcggcggcgcgccaag
gccattaatttcggtatcatctacggcatctcggccttcgggctcgccaaccagctctcc
atcccgcgcgaagaggcgagcgcctatatcaagaagtatttcgagcgctttcccggcatc
cgcgactatatggaccggatgaaggcagaatgccgtgcgaacggctatgtcgagaccgtc
ttcggccgcaagatgcattttccggcgatcgaatcgaagaacccgtccgaacgggccttc
gtcgagcggcaatccatcaacgcgccgatccagggctccgcctccgacgtcatccgccgc
gccatgagccgcatggacgccgccctcctcaaggccgggctctcggccaagatgctgctg
caggtgcatgacgaactggtcttcgaggcaccggaggaggaagtcgaggcgacgctgccg
gtggtctcccaggtgatggagcacgccgcgcttccggccctgcagctcaaagtgccgctg
caggtcgaggcacgggccgccagcaattgggaagaggcgcattga
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