Labrys sp. KNU-23: FZC33_24000
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Entry
FZC33_24000 CDS
T06193
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_24000 (addA)
Enzymes [BR:
lne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZC33_24000 (addA)
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FZC33_24000 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
PE
AAA_12
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QEN89179
UniProt:
A0A5C1WJ24
LinkDB
All DBs
Position
1:3163898..3167341
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AA seq
1147 aa
AA seq
DB search
MIPRKPSPDTVLNQRLASDPSLSAWVSANAGSGKTTVLTRRVIRLLLAGVDASAILCLTF
TKAAAANMQNRIFATLGQWAVEEEGTLVAAIEGITGFKPDAAGLKRARQLFAAAIETPGG
LKILTIHAFCERVLHLFPFEANVPAQFSVLDDRAARELLDTARTSLILEANAHPEGGLGR
AMARLLEDTGEGAFDGLLAEITFEREALRPFLSEKGAADALDQLRGLLELAEGESVAAIE
AEIDEASIPFSEWAAIEAAMREYDSKRILDLADRLGAAIAAAPARRAEAWRAVFLTGTGE
ARSANAFLVKDFAKDYPAYAEQLLAELERIARLLQRRKAASAYERSEALITVAAALLGRY
KAGKVMRAALDFDDLVQRTADLLSRAGAEWVLYKLDRGIDHVLVDEAQDTSPAQWHIIAM
LAHEFTSGTGARSERRTIFAVGDEKQSIFSFQGAAPAEFARMRSHFRRKVDEAEERFEAI
ELKQSFRSTPDILKAVDHVFAAADNRRGLSSDDVATVHETVRALDPGRVEVWPVEKPQAA
AEITAWDAPFDETPVTSPVVRLARKIAAEVASLIRNGDPATGAHYDAGDVMVLVRSRNAL
FEAVIRALKFAGVPVAGADRIVLTDHIAVMDLMALARFVLLPADDLTLATVLKTPLIGLD
DEDLIRLAPGRKGTLWAALGEAAREDERFTSAFARLTAWRAEAAGKTPFAFFADILARDG
GRRIMLARFGAEAADALDEFLRVAGDYERANTASLQGFLAWLAEAKAEIKRDMDVARGEV
RVMTVHGSKGLEARVVILADTCSAPDGRHDPKLFFLQAPGRAAGSEIPVWSPSKASDPAP
VAAARDAIRAENEAEHRRLLYVALTRAEDRLVIAGFEGATARRPGNWYDMIADALREAGA
RVEPDGEGERLVYEPTPRRPVEGRPARDREAAVPVPAWLRQKAAPERFEEVALSPSETEH
PEELAGLAGALPTDPRTLRRGALIHALLQYLPDVEAPARRDQALAFLGRAAAQWPEDHQA
WAEEALAVLALPDLELLFAPGSRAEVALAGRIIRSGRADYAVSGRIDRLAVGPDAVWIVD
FKTNRQPPHGLDKVPPAYLSQLGLYRHLMMRLYPGKDVRVALVWTATAAIMELPAERLEE
AVRAVVG
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcgcaagccctctcccgacacggttctcaatcagcgcctggcctccgatccc
tcgctatcggcctgggtgtcggccaatgccggctcgggcaagaccaccgtgctgacgcgg
cgcgtcatccggttgctgctcgccggggtcgatgcctccgccatcctctgcctcaccttc
accaaggccgccgcagcgaacatgcagaaccgcatcttcgccacgctcggccaatgggcc
gtcgaggaggaaggcacgctcgtcgcggcgatcgagggcatcaccggtttcaagcccgat
gccgccggcctcaagcgcgcacgccagctcttcgcggcggcgatcgagacgcccggcggc
ctgaagatcctcaccatccatgccttttgcgagcgcgtgctgcacctcttccccttcgag
gccaatgtccccgcgcagttttcggtgctggatgacagggccgcgcgcgaactgctcgac
acggcccgcaccagcctgatcctggaggcgaatgcgcatcccgaaggcgggctcggccgc
gccatggcgcgcctcctggaggatactggcgagggcgccttcgacgggctgctcgccgag
atcaccttcgagcgcgaggcgctgcgtcccttcctgagcgagaagggcgccgcggacgcc
ctcgaccagttacgcggcctgctcgaactggcggagggcgaaagtgtcgccgcgatcgag
gccgagatcgacgaagcctcgatccccttcagcgaatgggcggcgatcgaggccgccatg
cgggagtatgacagcaagcgcatcctcgatctggccgacaggctgggcgctgcgatcgcg
gcggcgccggcacggcgtgccgaggcctggcgtgcggtcttcctgaccggcacgggcgag
gcgcgctcggccaatgccttcctggtcaaggatttcgccaaggattatcccgcttacgcc
gagcagctcctcgccgagctggagcgcatcgccaggctgctgcaacggcgcaaggcggcc
tcggcctatgagcgcagcgaggcgctgatcaccgtggcggcggcattgctcggccgctac
aaagccggcaaagtaatgcgggcggcgctcgatttcgacgacctcgtgcagcgcacggcc
gatttgctcagccgggccggcgctgaatgggtactctacaagctcgaccgaggcatcgac
cacgtgctggttgacgaggctcaggataccagccctgcccaatggcatatcatcgcgatg
ctggcccacgaattcacctcgggcacgggtgcgcgcagcgagcggcgcaccatcttcgcc
gtgggtgacgagaagcagtcgatcttctcgttccagggcgcggcgccggcggagttcgcc
cgcatgcgcagccatttccgtcgcaaggtcgatgaagccgaggaacgtttcgaggcgatc
gagctcaagcagtccttccgctcgacacccgacatcctcaaggcggtcgaccatgtcttc
gccgctgccgacaaccgtcgcggcctgtcctcggacgacgtcgcaaccgtgcatgagacc
gtgcgggcgctcgatcccggccgcgtcgaggtctggccggtggaaaaacctcaagctgcg
gccgagatcaccgcctgggacgcgccgttcgacgagacgcccgtcaccagcccggtggtt
cggctggcgcgtaagatcgccgccgaggtggcgagcctcatccggaacggtgatcctgcc
acgggtgcgcactacgatgccggcgacgtcatggtgctggtgcgcagccgcaacgcgctg
ttcgaggcggtgatacgtgccctgaaattcgccggcgtgccggtggccggcgccgatcgc
atcgtgctaacggaccatatcgccgtgatggacctgatggcgctcgcccgtttcgtgctg
ctgccggccgacgacctgacactggcgacggtgctcaagaccccgctgatcgggctcgat
gacgaggatctcatccgtttggcgccgggccgcaagggcacgctctgggctgccttgggc
gaggccgcgcgggaagacgagcgcttcacctctgcctttgcccgccttacggcctggcgt
gcggaggccgccggcaagacgccctttgcctttttcgccgacattctggctcgcgacggc
ggtcggcgcatcatgctcgcccgcttcggtgcggaggcggccgacgccttggacgaattc
ctgcgcgtggccggcgattatgagcgggccaacaccgccagcctgcagggcttccttgcc
tggctcgccgaggccaaggccgagatcaagcgcgacatggacgtggcacggggcgaagtg
cgcgtgatgacggtgcacggctccaaggggctggaggcgcgcgtcgtcatcctggccgat
acctgcagcgcgccggacggccggcatgatcccaaactgttcttcctgcaggcgccgggc
cgggccgccggcagcgagattccggtctggtcgcccagcaaggcctcggaccctgcgccg
gtcgccgcggcccgcgatgcgatccgggcggagaacgaggccgagcatcgccgcctgctc
tatgtcgccctgacgcgtgccgaggaccggctcgtcattgccggcttcgagggggccact
gcgcggcggcccggcaattggtacgacatgatcgccgacgccctgcgcgaggcgggtgcc
agggtcgagccggatggcgagggcgagaggctggtctacgaaccgacgccgcggcgcccg
gtcgaaggccggccggcaagggaccgggaagcggctgtgccggtaccggcctggctgcgc
cagaaagcggcgcccgagcggtttgaggaggttgctctcagcccgtccgagacggagcat
ccggaggaattggccgggctggcgggagccttgccgaccgatccccgcactctgcggcgg
ggggcgctgatccacgctttgctgcaatatctgcccgatgtcgaggcgccggctcgtcgc
gaccaggccctcgccttcctcggtcgggcggcagcgcaatggccggaagaccatcaagcc
tgggccgaggaggccctggcggtgctggccctgcccgatctcgaactgctcttcgcaccc
ggcagccgcgccgaggttgcccttgcaggccgcatcatcaggtcgggacgggccgactat
gccgtatccgggcggatcgaccgcctggccgtcggtccggacgcggtttggatcgtcgac
ttcaagaccaaccgccagccgccgcacgggctcgataaggtgccgccagcctatctcagc
caactcgggctctatcggcacctgatgatgcggctctatccgggcaaggacgtgcgggtt
gccctggtctggaccgccacggccgcgatcatggaattgccggcggagcgcctggaagag
gccgtgcgggcggttgtggggtag
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