Labrys sp. KNU-23: FZC33_25620
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Entry
FZC33_25620 CDS
T06193
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne03030
DNA replication
lne03430
Mismatch repair
lne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZC33_25620
03430 Mismatch repair
FZC33_25620
03440 Homologous recombination
FZC33_25620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lne03032
]
FZC33_25620
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_25620
Enzymes [BR:
lne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZC33_25620
DNA replication proteins [BR:
lne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FZC33_25620
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FZC33_25620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QEN89483
LinkDB
All DBs
Position
1:complement(3507482..3508510)
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AA seq
342 aa
AA seq
DB search
MASIERRAVDAFIKKPDAHFVVVMVYGPDTGLVSERVRALVAASVDDVDDPFQLVRLDGD
EISGDPARLADEVFTIPLFGGRRAVRLRAGSRNIVPAVEPVLANPPTACRVVIEAGDLKK
SHALVSLVEKSRAGAVIACFGDENANIGQIIAEEVANAGLTIAPEARETLIGLLGGDRLA
TRSELKKLALYAHGAGRIELSDVEAVVGDASALATDEIIDAAFSGRADLLDATLAKAWNE
GVNTSQLAGTALRHALLLHRLRGEVEKGRPAASVVDSMGMQVHFRRKAGVSAQLSALAMT
RLDRIVADLSEAVLDARRNAALGQAIVSRALMRIALMAKPRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcgaacggcgcgccgtcgatgccttcatcaagaagccggatgcccatttt
gtggtggtcatggtctatggaccggacaccggcctggtgagcgaacgtgtccgtgcactg
gtggcggcctcggtcgacgatgtcgacgatcccttccagctcgttcgcctcgacggtgac
gaaatcagcggcgatccggcccgcctggccgacgaagtcttcaccatccccctcttcggt
gggcgccgcgccgtgcgcctgcgcgccggcagccgcaacatcgtgccggcggtcgagccc
gtgctcgccaacccgccgacggcctgccgggtggtgatcgaagccggcgatcttaagaag
agccacgctttggtctccctggtggagaaatcccgcgctggcgcggtgatcgcctgcttc
ggcgacgagaatgccaatatcggccagatcatcgccgaggaagtcgccaatgccggcctg
accatcgcgcccgaagcgcgcgagacgctgatcggccttctcggcggcgaccgcctggcc
acccgcagcgaattgaagaaactcgcgctctacgcccatggcgcagggcgcatcgaattg
agcgacgtcgaggccgtggtgggcgatgccagcgccctcgccaccgacgagatcatcgat
gccgccttttccggccgggccgatctgctcgacgccaccttggccaaagcctggaacgag
ggcgtcaacacctcgcaactggcgggaacggcgctgcgccacgctctgctgcttcatcgc
ctgcgcggcgaggtcgagaaaggccgccctgcggcctcggtggtcgattcgatgggcatg
caggtgcattttcgccgcaaggcgggcgtctcggcccagctctcggccctggcgatgaca
cggctcgaccgcatcgtggcggacctgtcggaagccgtgctcgatgcccgccgcaatgcc
gccctggggcaggcgatcgtctcgcgcgccttgatgcggatcgccctgatggcaaagccc
cggcgctga
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