Labrys sp. KNU-23: FZC33_25780
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Entry
FZC33_25780 CDS
T06193
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lne03016
]
FZC33_25780 (truB)
Enzymes [BR:
lne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FZC33_25780 (truB)
Transfer RNA biogenesis [BR:
lne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZC33_25780 (truB)
Prokaryotic type
FZC33_25780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEN89512
LinkDB
All DBs
Position
1:complement(3542467..3543387)
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AA seq
306 aa
AA seq
DB search
MSAPRSTRVEVNGWIILDKPVGMTSTQGVAVVKRVFNAKKAGHAGTLDPLASGILPIALG
EATKTVPYVMDGRKVYRFTVTWGVETNTDDTEGGPVATSDLRPEKAEIEALLPRYTGVIS
QVPPRFSAIKVDGERAYDLARDGEEVELEARNIEVHALRIVEFTGETTTFEAECGKGTYV
RALARDLGRDLGCYGHVTALRRAMVGTFDEQDAVTPDELRAMKEGTPDLPPLAEALLPVE
TALEALPTLVVSQHDAGRLARGQGVILRGRDAPVFEGVAAVMSGGTLVALAELERGELLP
KRIFKL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccccgttcaacccgcgtcgaggtcaatggctggatcatcctcgacaagccc
gtcggcatgacctcgacccagggcgtcgccgtggtcaagcgtgtgttcaacgccaagaag
gcgggccatgccggcacactcgatcctctggcctccggcatcctgcccatcgccctcggt
gaagccaccaagacggttccctatgtcatggacggccgcaaggtctaccgcttcaccgtc
acctggggggtggagaccaacaccgacgataccgaaggcggcccggtggcgacctccgac
ctcaggcccgagaaagccgagatcgaggccttgctaccccgctacaccggcgtgatcagc
caggtccccccgcgcttttccgccatcaaggtggatggcgagcgcgcctatgaccttgcg
cgggacggcgaggaggtcgagctcgaagcccggaatatcgaggtccatgccctgcgcatc
gtcgaatttaccggcgagaccaccactttcgaggccgaatgcggcaagggcacctatgtc
cgggctctcgcgcgcgacctcggccgcgacctcggctgctacggccatgtcaccgccctg
cgccgggccatggtcggcaccttcgacgagcaggatgcggtaacgccggacgaattgcgc
gccatgaaggaggggacccccgatctgccgccgctggcggaagccctgctgccggtggaa
accgccctcgaggccttgccgaccctggtggtttcccagcacgatgccggccgcctcgcc
cgtggccagggtgtgatcctgcgcggccgcgacgcaccggtcttcgaaggcgtggcagca
gtgatgtccggcggcacgctggtggcgctcgccgaactcgagcgcggcgaattgctgccc
aagcgcatcttcaaactatag
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