Labrys sp. KNU-23: FZC33_27540
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Entry
FZC33_27540 CDS
T06193
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lne03009
]
FZC33_27540
Enzymes [BR:
lne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FZC33_27540
Ribosome biogenesis [BR:
lne03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FZC33_27540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QEN89834
LinkDB
All DBs
Position
1:3916324..3918657
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AA seq
777 aa
AA seq
DB search
MSDDKRSGGGGRKPPSGGKKPFGPKKTSADAGPRRRGVDGDAPPRRSFRDRDEGGEGRRE
RPARSFAERQNNERQDGERRPARFKPREGGDFEARPARRPFREREGGEERPFKPRRQDDR
GTRAEGGFRPRRDAERGEGSERPFSRKPGRSAGDGERSFAPRRFDTSFEPREGGRKAFEP
RFDDRQEKSGHEERGQKRAPRRAEPKPEAAAEPGAYAGERVAKVIARAGLGSRRDAETWI
EEGRVAVNGEVLTSAALNVLPDDKVTVDGKLLPRRERTRLWLYHKPRGLVTTEKDPEGRP
TVFENLDPSLPRVMSVGRLDINTEGLLLLTNDGGLARQLELPKTGWLRRYRVRAFGETDQ
VKLDALFEGLTIDGIDYGRIEARLDKEQGSNSWLTLGLREGKNREVKNVLGSIGLEVNRL
IRVSYGPFQLGDLAEGAVEEVKTRVLMDQLGPELVAEAGCEFEAPIHEAGGEKPAKAAAK
PARGGPSRGLRVKAEEGGKERVMRGGLVEDRHGRRVLVQRVADIPDEKPARRKPFRARDE
EGGDRPFKPRPAFRDRDEGGERPRKPFRVRSEEGGDRPYKPRPSFRDRDEGGERPRKPFR
PREEGGGDRPFKPRPSFRDRDEGGERPHKPFRARNEEGGDRPFKPRPSFRDRDEGGERPH
KPFRARSEEGGDRPFKPRPSFRDRDEGGERPRKPFRARSEEGGDRPFKPRPSFRDRDEGS
ERPRKPFRPREEGGSDRPFKPRASFRDRNEGGERPSKPRPSAPRPGGKPGGSPRRGR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgataaacgatctggcggcggcggccgcaagcccccaagcgggggcaagaag
ccatttggccccaaaaagacctccgctgacgccgggcctcgtcgacgcggcgtggatggc
gacgcgcccccccgccgctccttccgggatcgcgacgagggcggcgagggccgccgggag
cggccggcccgttcctttgccgagcgccaaaacaacgagcgtcaggatggcgagcgtcgt
ccggctcgtttcaagccgcgcgagggcggggatttcgaggctcgtcccgcccgccgcccg
ttccgcgagcgcgagggtggcgaggagcgtccgttcaagccgcgccgccaggacgaccgt
ggcacgcgcgcggaaggcggctttcggccgcgccgcgatgcggaacgcggggaggggagc
gagcgtcccttcagccgcaagcccggccggagtgctggcgacggggaacggtccttcgcg
ccgcgccgcttcgatacctctttcgagccgcgcgagggcgggcgcaaggccttcgagccg
cgcttcgatgatcgtcaggaaaaaagcggacatgaagaacgcggccagaaacgtgcgccg
cgtcgggccgaacccaagccggaggccgcggccgagcctggcgcctatgccggcgagcgt
gtcgccaaggtaatcgcacgggccgggcttggatcgcgccgcgacgccgagacctggatc
gaggaaggccgggttgccgtcaatggcgaagtgctgaccagcgcggcgctcaacgttctg
ccggatgacaaggtcaccgtcgacggcaagctcctgccccggcgcgagcgtacgcggttg
tggctctaccacaagccgcgcggcctggtgaccacggaaaaggaccccgagggacgcccg
accgtgttcgagaacctcgacccgtccttgccgcgcgtcatgtcggtcggccggctcgat
atcaacaccgaaggcctgctgctgctgaccaatgacggcggtttggcgcgccagctcgag
ttgcccaagaccggctggctgcggcgctatcgcgtgcgggccttcggcgagaccgaccag
gtcaagctcgacgccttgttcgaagggctgacgatcgacggcatcgactatggacgcatc
gaggcccgtctcgacaaggagcagggctccaattcctggctgaccctggggttgcgcgaa
ggcaagaaccgcgaagtcaagaatgtgctgggttccatcggtctggaggtcaaccgcctg
atccgggtttcctatggcccgttccaactcggcgacctggccgagggggccgtcgaggaa
gtgaagacccgggttctgatggaccagctcggccctgaactggtcgccgaggccggctgc
gagttcgaagcgccgatccacgaagccggcggcgagaagcccgccaaggctgcggccaag
cctgccaggggtggtccgtcgcgcggactgcgcgtcaaggccgaggagggcggcaaggag
cgcgtgatgcgtggcgggctggtcgaggatcggcatggccgccgtgtgctggttcagcgc
gttgccgacattcccgatgaaaaaccggcccggcgcaagccgttccgtgcgcgtgacgag
gagggcggtgaccgcccgttcaagccgcgtcccgctttccgtgaccgtgacgagggtggc
gagcgtccgcgcaagccgttccgtgtgcgcagcgaggagggcggcgaccgcccgtacaag
ccgcgtccatccttccgggaccgcgacgaaggtggcgagcgtccacgcaagcccttccgt
ccgcgtgaggaggggggcggcgaccgtcccttcaagccgcgtccatccttccgcgaccgc
gacgaaggcggcgagcgtccgcacaagccgttccgcgcgcgcaacgaggagggcggcgac
cgtcctttcaagccgcgtccgtccttccgtgaccgcgacgaaggcggcgagcgtccgcac
aagcctttccgcgcacgcagcgaagagggcggcgaccgtcccttcaagccgcgtccgtcc
ttccgtgaccgcgacgaaggtggcgagcgtccgcgcaagcctttccgcgcacgcagcgaa
gagggcggcgaccgtcccttcaagccacgtccgtccttccgggaccgcgacgagggcagc
gagcgtccgcgcaaacccttccgcccgcgtgaggagggggggagtgatcgcccgttcaag
ccacgtgcctccttccgggaccggaatgagggcggtgagcgtccctccaagccgcgtccc
tccgcgccgcgtcctggcggcaagccgggcggctcgccgcgccgggggcgttga
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