KEGG   Labrys sp. KNU-23: FZC33_28870
Entry
FZC33_28870       CDS       T06193                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lne  Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:lne00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lne02044]
    FZC33_28870 (tssC)
Secretion system [BR:lne02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FZC33_28870 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QEN90074
LinkDB
Position
1:complement(4193744..4195225)
AA seq 493 aa
MNAKTQAKRDVVVETSADENLLTQVVAATRQTEPDRAQDLLRTLTDQALKGTVVYDRNLT
VTLNNAIAALDKTISRQLAAIMQSPEFTKLEGAWRGLNYLVKNSETSVNLKIRVLNASKR
DLARDLSKAVEFDQSRLFKSIYEDEFGTPGGEPMGAIVGDYEFDNSFDDVQLLQGLSSIA
AAAFAPFISAASPRMFGFEDYRDLARPRDLEKIFETVEYAKWRSLRESDDSRFVTLALPR
VLARMPYGPKTHPIDEFGYDETGDSKTGELPHDNYCWMNAAYVMGTRLTEAFAKYGWCTA
IRGAENGGKVENLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
VFFGAQTTHKPKLYDRPEANANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAKDCE
AWLNRWISNYVNANDEAGEETRARYPLRDAKVTVQEVPGKPGSYNAVAWMRPWLQMEELT
TSLRMVARIPAKN
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgaatgccaagactcaagccaagcgcgatgtcgtcgtcgaaacctccgcggacgagaat
ctgctcacccaggtcgtcgcggccacgcgccagaccgagccggaccgcgcccaggatctg
ctgcgcaccctgaccgaccaggctctcaagggcacggtcgtctacgaccgcaacctgacg
gtgacgctcaacaacgccatcgccgccctcgacaagacgatctcgcgccagttggcggcg
atcatgcagtctcccgaattcaccaagctcgaaggcgcctggcgcggcctcaactatctg
gtgaaaaacagtgagaccagcgtcaatctgaagatccgggtgctcaacgcctccaagcgt
gatcttgccagggacctgtccaaggccgtcgagttcgaccagtcgcgcctgttcaagtcg
atctatgaagacgagttcggcacgcccggcggcgagccgatgggcgccatcgtgggcgac
tacgaattcgacaactccttcgatgacgtgcaactgctgcagggcctgtcctcgatcgcg
gcagcggccttcgcccccttcatctcggcggcgagcccgcgcatgttcggcttcgaggac
tatcgcgacctggcccgcccgcgcgatctcgagaagatcttcgagacagtcgaatatgcc
aagtggcgttccctgcgggaaagcgacgattcgcgtttcgtcaccctggccctgccgcgc
gtcctggcccgcatgccctatgggcccaagacgcatcccatcgacgaattcggctatgac
gagaccggcgattccaagaccggcgagctgccgcatgacaattactgctggatgaatgcc
gcttatgtcatgggcacgcgcctgaccgaggcctttgccaaatatggctggtgcaccgcc
atccgcggcgccgagaatggcggcaaggtcgagaacctgccgatgcacatcttctccagc
gacgacggcgatctcgatctcaaatgccccaccgaggtcggcatcaccgaccggcgcgac
gccgaactgggcaagctcggattcctgccgctgtgccactacaagaacaccgattacgcg
gtgttcttcggcgcgcagacgacgcacaagcccaagctgtacgaccggcccgaggcgaat
gccaatgccgccgtttcggcccgcctgccctacatgatggcgacctcgcgctttgcccat
tatctgaaggtgatgggccgcgacaagatcggctccttcatggaggccaaggattgcgag
gcctggctcaatcgctggatttccaattacgtcaacgccaatgacgaggcgggcgaggag
acccgggcacgctacccgctgcgcgatgccaaggtgacggtgcaggaagtcccgggcaag
cccggctcctacaatgccgtggcctggatgcgaccctggctgcagatggaggaactgacg
acctcgctgcgcatggtcgcccgtattcccgccaagaactga

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