Labrys sp. KNU-23: FZC33_31470
Help
Entry
FZC33_31470 CDS
T06193
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lne
Labrys sp. KNU-23
Pathway
lne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FZC33_31470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lne03021
]
FZC33_31470
03400 DNA repair and recombination proteins [BR:
lne03400
]
FZC33_31470
Enzymes [BR:
lne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FZC33_31470
Transcription machinery [BR:
lne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FZC33_31470
DNA repair and recombination proteins [BR:
lne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FZC33_31470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
QEN91384
UniProt:
A0A5C1WQ88
LinkDB
All DBs
Position
1:4772492..4773508
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPQKLEVTPGEDPKSQATAVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
SVHIDGVLHEFSSIPGVREDVTDIVLNIKEIAVKMGAEGPKRIVLKKQGPGQVFAGDIQT
TGDIQILNPEHVLCTLDEGAEIRMEFTVNTGKGYVAADRNRPEDAPIGLIPVDSLYSPVK
KVAFKVENTREGQILDYDKLTLTIETNGSITPEDALAFAARIIQDQLEVFVNFEEPKKES
EAPAIPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVPGWPPENIEELAKRFEEHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagaagaactggcaggaacttatcaagccccaaaagctcgaagtgactccggga
gaagatccgaagagccaggcaacagccgttgccgagccgctggagcgtggctttggcgtg
actttgggcaatgcgctgcgccgtgtcttgttgtcgtccctgcagggtgcggccgtgacg
tcggtgcatatcgatggcgtgttgcacgagttctcgtcgatcccaggcgtgcgtgaggac
gtgaccgacatcgtcctcaacatcaaggaaatcgccgtcaagatgggggccgagggaccc
aagcggatcgtgctgaagaagcagggtccgggtcaggtcttcgctggcgacatccagacc
accggcgacatccagatcctcaatcccgagcacgtgctgtgcacgctggacgagggcgct
gagatccgcatggagttcaccgtcaacaccggcaagggctatgtggcggctgaccgcaac
cggcccgaggatgctccgatcggtctcatcccggtcgacagcctttactcgccggtgaag
aaagtggctttcaaggtggagaacacccgtgaaggccagatcctcgactatgacaagctg
acgctgacgatcgagaccaacggttcgatcacaccggaagacgcgctcgcctttgcggcc
cgcatcatccaggaccagctcgaagtcttcgtcaacttcgaggagccgaagaaggaatcc
gaggctccggcgatcccggaactcgccttcaacccggcgctgctcaagaaggtggacgag
ttggaactgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatcggt
gatctgatccagaagacggaagccgaaatgctccgtacgccgaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgctggctcagatgggtcttcatctgggcatggaagtgccc
ggctggccgccggaaaacatcgaagagctcgccaagcgcttcgaagaacattattga
DBGET
integrated database retrieval system
