Liquorilactobacillus nagelii: BSQ50_00885
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Entry
BSQ50_00885 CDS
T06235
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03420
Nucleotide excision repair
lng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSQ50_00885
03430 Mismatch repair
BSQ50_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_00885
Enzymes [BR:
lng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSQ50_00885
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSQ50_00885
MMR (mismatch excision repair)
Other MMR factors
BSQ50_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
AAA_19
Viral_helicase1
UvrD_C
PhoH
AAA_16
FcoT
DUF3463
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUJ31250
UniProt:
A0A3Q8CBF6
LinkDB
All DBs
Position
203229..205532
Genome browser
AA seq
767 aa
AA seq
DB search
MAAEIKQQEQQYMNQVVTKIKIAEKENQQKIDQVKHDAQQLQQDFPHNLRLKTETYTGMM
ETAMTVRQQQQLLTERENDWQHAERRLDILTKMEKKPYFARIDFQESTAAKVETIYIGLG
SFADRPDNFLIYDWRAPISSIYYEGHLGDVSYQTPGGTQTVNVTLKRQFLVANGKILTVF
DTDETVGDQMLLEALGENADTKMKSIVTTIQQEQNKIIRDTKAKLLFVQGAAGSGKTSAV
LQRAAFLLYRFRGSLTSSQLVLFSPNQLFNDYIAQVLPDLGEQRMVQLTYYQYAQHRLPR
FQIETLQQRFERKVTPTEATVTRLKSSLIFHQATLDYAAYLEKQGMAFRDIMSGKQIIFS
KAQIAQIYYSFNENYHLRNRLDATKERLLKRLMRKINRAAASDEVQKQLQDASAEQLSAL
YGDHPRNFQNADQELKFLGKQLVIKSFRQVQRQIKRNHFINITAQYYRFLKNLPKILELE
KAGLTLTDWQAAVADYKARTKHGQLLLEDATPYLQLYDLITGKRGDTEIKQVFIDEIQDY
TPYQLAFIQQNFPRARFTLLGDLNQAIFTKNASYTLLNELNKLFPADQTKVVQLTKSYRS
TKQITEFSRQLLLDGAAIQPFDRNGDLPTIYTATSQTLLLKQAVKQLQVNQQADLTTAII
CRTLNQCQQLTQQLQQAGQSVTLIKTENQRLAAGTIIVPAFLAKGLEFDAVIFWNANAQE
YAKDDQRQLVYTICSRAMHRLTIMAKGELSPLFARVDADTYRLTLLD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagattaaacaacaagaacagcagtacatgaatcaagttgtgactaaaata
aaaattgcagaaaaagaaaatcagcaaaaaattgaccaagttaaacatgatgcccaacaa
ttacagcaggattttccacataacttgcggttaaagacggaaacctataccggtatgatg
gaaacagcgatgactgttcggcaacaacaacaattgctgacggaacgtgaaaatgattgg
caacatgctgaacgccgcttagacattttgaccaaaatggaaaagaaaccttactttgcc
cgaatcgattttcaagaatcaactgctgctaaagtagaaacaatttatattggtttgggt
tcttttgctgatcgtcccgataatttcttaatctatgattggcgtgcaccaatttctagt
atttattatgaagggcatctgggagatgtcagctatcaaactcccggcggaactcagacg
gttaatgtgacgttgaaacggcaatttttagttgctaatggcaaaattctaacagttttt
gatactgatgaaactgttggcgatcaaatgctgttagaagcactgggtgaaaacgcggat
acgaaaatgaaaagtatcgtaaccactattcaacaagaacaaaacaaaattattcgagat
acgaaagccaagttgctgtttgtgcaaggtgcagctggttctgggaaaacgtctgctgtt
ttgcagcgggcagcctttttactgtatcgttttcgcggtagcttgacatctagtcaattg
gttttattctcaccaaatcaattatttaatgattatattgctcaagtcttaccagatttg
ggagaacaacgaatggtgcagttgacatactatcagtatgcacagcatcgattaccaaga
tttcaaattgaaacattacaacaaagatttgaacggaaagttactccaacagaagcaact
gttacgcgattaaaaagtagtttgatatttcatcaagccacattagattatgctgcttat
ttggaaaaacaaggaatggcttttcgcgatattatgtctggcaagcaaattatttttagc
aaagctcaaattgcccaaatttattacagttttaatgaaaattatcatttacgtaatcga
ttagatgccaccaaagaacgcctattaaaacgtttaatgcgtaaaatcaatcgtgccgca
gcttctgatgaggttcaaaaacaactccaagatgcttcagctgaacaattgtcagctttg
tacggcgatcatccacgtaattttcaaaatgctgatcaagaattgaagtttttaggcaaa
caattagtaattaaatctttccgtcaagttcaaagacagattaagcggaatcatttcatt
aatattactgcccaatattatcgattcttaaagaacttgcccaagattttggaactagaa
aaagctggtttaactttaactgactggcaagcagcggtagcggattataaagcacggact
aagcacggacaattactattggaagatgcaacaccatatcttcagttatatgacttgatc
acgggtaaacgcggtgatacagaaattaagcaggtctttattgatgaaattcaagactat
acaccctatcaattggcctttattcaacaaaattttccccgggcacgctttaccttacta
ggtgatttgaatcaagcaatttttactaaaaatgccagctatactttgctgaatgaattg
aacaaattattcccagctgaccaaacaaaagttgttcaattaaccaaatcgtatcgttca
accaagcaaattacggagttttctcggcagctgttattggacggagcagcaattcaacca
tttgaccgtaacggtgatttgccgacgatttacacagctacaagtcagacactattgttg
aagcaagcagttaaacaattgcaagtcaatcaacaggcggatttaactacagcaataatt
tgtcgcacgttgaatcagtgtcagcagttaactcagcaactacaacaagctggacagtca
gttactttaattaaaactgagaatcagcgtttagcagcaggaacaattattgtaccggcc
ttcttggcaaagggtctggagtttgatgcggtaattttctggaatgctaatgcccaagaa
tatgctaaagatgatcagcgacagttggtttatacgatttgttcgcgagcaatgcatcga
ttgacaattatggctaagggcgagttgtcgcctttgtttgctcgggtagatgctgacaca
tatcgcttgactttgcttgattga
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integrated database retrieval system
