Liquorilactobacillus nagelii: BSQ50_01425
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Entry
BSQ50_01425 CDS
T06235
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lng
Liquorilactobacillus nagelii
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lng03016
]
BSQ50_01425
Enzymes [BR:
lng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BSQ50_01425
Transfer RNA biogenesis [BR:
lng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BSQ50_01425
Prokaryotic type
BSQ50_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AUJ31340
UniProt:
A0A3S6QTP6
LinkDB
All DBs
Position
305994..306755
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AA seq
253 aa
AA seq
DB search
MAIRYKVTLAYDGTAFAGFQVQPHQRTVQGVLERAVNHLNKSSDYVHVFGSGRTDAGVHA
VGQVIHFDLVNDIPDQGIINGLNSLLPLDIEIKMAEHVTADFHAQFTAHGKRYVYRVSQT
KAVNPFKRFYTGHYKYPLEVNLIKTALKDVVGTHDFSSFVASGSQTKSHIRTIYTATVKE
LPQEKELVFEFYGNGFLYNQVRIMVAALLEIGSKRRPVHDFLRLYQVKDRNECRGTAPAS
GLYLKEVVYQPDK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttggcaattagatataaagtaaccttggcttacgatgggacggcttttgcaggatttcaa
gttcaaccgcaccaacgaaccgtccaaggagttttggagagagctgttaatcatttaaat
aaatcatccgactatgttcatgtttttggatcaggtcgtactgatgcaggagtacacgca
gttggccaggtaattcactttgatttagttaatgatattcctgatcaaggaattattaac
ggtttaaatagcttgctgcctttggatattgaaataaaaatggctgagcacgtaacagca
gattttcatgctcaatttacagctcatggaaaacgttatgtttatcgggttagtcaaact
aaggccgttaatccctttaaaagattttacaccgggcactataaatacccgttggaggta
aatctgattaagacagctttaaaggatgtagttgggacgcacgatttttccagttttgtt
gcttcgggaagccaaactaaatcacatatcaggactatctatactgcaactgttaaagag
ttaccgcaagaaaaagaattagtttttgaattttatggtaacggatttttatataatcag
gtacggattatggttgctgcactattggaaatcggtagtaaacggcggccggtccacgat
tttttgcgactttatcaagttaaggatcgtaatgaatgtcgcggaacagctcccgctagt
ggtctgtatctcaaagaagttgtttatcagccagataaataa
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