Liquorilactobacillus nagelii: BSQ50_06145
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Entry
BSQ50_06145 CDS
T06235
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lng
Liquorilactobacillus nagelii
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lng03032
]
BSQ50_06145
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_06145
Enzymes [BR:
lng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSQ50_06145
DNA replication proteins [BR:
lng03032
]
Prokaryotic type
DNA Topoisomerases
BSQ50_06145
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSQ50_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
HypA
Motif
Other DBs
NCBI-ProteinID:
AUJ32171
UniProt:
A0A3S6QVI0
LinkDB
All DBs
Position
complement(1298659..1300779)
Genome browser
AA seq
706 aa
AA seq
DB search
MPTVQKKTKTKTTKTKTTRKRKKKLVIVESPSKAKTIEKYLGSTYKVMASLGHIRDLPKS
TMGIDMENNYQPHYISIRGKGDVIKELRKEAKKASKVYLAADPDREGEAIAWHLSYLLGL
DPKDSNRVVFNEITKDAVKNAFKYPRSINMDLVDAQQARRVLDRLVGYSISPLLWAKIKK
GLSAGRVQSIALNLIIKREQEIRNFKPEEYWTIDAKFKSGQQQFSASFLGIDGKKKPLKN
NDDVQAILQRLDSKKTFLIKKVDKKERQRFPALPFTTSTMQQAANNILKFRTQKTMMVAQ
QLYEGINLGKGGSVGLITYMRTDSTRVSNIAVHETSEFIHEKYGSEYAAVKPRKGKLAEG
AQDAHEAIRPSSTMRTPDSIKEYLNKDQFKLYSLIWSRFVASQMTPAIFDTMSVDIEQNQ
VTYRARGSKMKFPGFTLVYKEAKHKDNNLPDLKVNQSVKLISNQPDQHFTLPPARYTEAA
LIKTLEENGVGRPSTYAPTLGTIQKRYYVKMAARKFEPTELGEIVNSMMEKCFPDILNVD
FTANLEDQLDEIEEGKQEWVKVIDQFYQPFAKEVTSAEEKMAKVKIKDEPAGINCDICGA
PLVIKLGRFGKFYACSRFPDCRNTKPIVKEIGVTCPKCQQGEVIERKSKKNRVFYGCSRY
PECDFVSWDKPVGRTCPKCQHYLIEKKSKNSKKIKCSNCDYVEAEK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccaacggttcagaaaaaaacgaagaccaaaacaacgaagaccaaaacaactagaaaa
aggaaaaagaaactcgtaatcgttgagtcaccttcaaaagcaaaaacaattgaaaaatat
ttaggttcgacctataaagttatggccagcttaggtcatattcgtgatcttcctaaaagt
acaatgggaattgatatggaaaataattatcaaccacattatatttcaattcgtggaaaa
ggtgatgtgattaaggaattaagaaaagaagccaaaaaagccagtaaagtttatttagca
gccgatcctgatcgtgagggagaagctattgcttggcatttgtcttatcttttagggctc
gatcccaaagatagtaatcgagttgttttcaatgaaattacgaaagacgctgtcaaaaat
gcattcaaataccctcgttcaatcaacatggatttagttgatgctcagcaggctcgccga
gttctagatcgcttagttggttattcaatcagtcctttattgtgggcgaaaataaaaaaa
gggttaagtgctggccgtgttcaatctattgcattgaacttgataattaagcgtgaacaa
gaaattcggaattttaaaccggaagagtattggacaatagatgctaaattcaagagcgga
caacaacaattttctgcaagctttttaggaattgacggtaagaaaaagcctttaaaaaat
aatgatgatgtacaagctattttacagcgcttagattctaaaaaaacttttctaataaaa
aaagttgataaaaaagaacgtcaacgatttccagcattacctttcacgacaagtacaatg
cagcaagcagctaataatattttgaaatttcggacgcaaaaaacgatgatggttgcgcag
caattgtatgaaggaattaatcttggtaaaggtggatcagttggtttaattacttatatg
cgaactgattcgactcgagtttccaatatcgcagttcatgaaacatcagaatttattcat
gaaaaatatggtagtgaatatgcagctgttaaaccacggaagggaaagttggctgaaggg
gcacaagatgcccatgaagcaatccgaccttcttcaaccatgcggacaccggattcgatt
aaagagtatctaaataaagatcaatttaaattgtattcattaatttggtctcgctttgtt
gccagtcagatgacaccagcaatttttgatacgatgtcagttgatatcgagcaaaatcaa
gtaacatatcgtgcacgtggctcgaagatgaaatttcctggttttacgttagtttataaa
gaagcaaagcacaaagataataatttgccagacttgaaagtcaaccaatcggtaaaattg
atttctaatcaaccggatcagcatttcactttaccaccagcacgatataccgaagcggcg
ttaattaagactttggaagaaaatggtgttggccggccatcaacctatgcaccaacctta
ggtacaattcaaaaacgttattatgttaagatggcagctcgtaagtttgaaccgactgaa
ctgggtgaaattgttaattcaatgatggaaaaatgcttcccagatattttaaatgttgat
tttacagcaaacctagaagatcaacttgatgagattgaagagggaaagcaggaatgggtt
aaagtaatcgatcagttctaccaaccctttgctaaagaggtcacctcggcagaagaaaaa
atggctaaagttaaaattaaggatgaaccggcaggaattaactgtgatatttgtggggca
cctctagtgattaaattaggccgtttcggtaagttttatgcctgcagtcgtttcccggat
tgccgcaacaccaaaccaatagttaaagaaattggtgttacttgtcctaaatgtcagcag
ggtgaagttattgagcgaaaatcgaaaaaaaatcgtgttttctatggctgttcacgttac
ccagaatgtgattttgtgtcatgggataagccagttggacgaacttgccctaaatgtcag
cattatttgattgaaaagaaaagtaagaatagcaaaaaaatcaaatgcagcaattgtgat
tatgttgaggcagaaaaataa
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