Liquorilactobacillus nagelii: BSQ50_06270
Help
Entry
BSQ50_06270 CDS
T06235
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSQ50_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lng03019
]
BSQ50_06270
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_06270
Enzymes [BR:
lng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSQ50_06270
Messenger RNA biogenesis [BR:
lng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSQ50_06270
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSQ50_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
DAGK_cat
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AUJ32194
UniProt:
A0A3S6QVV1
LinkDB
All DBs
Position
complement(1322549..1324030)
Genome browser
AA seq
493 aa
AA seq
DB search
MLTKSELSAGLQRYFGYQSFKLGQSDTLMALGEQHCAVAILPTGTGKSLCYQLYGLMTKQ
PVLVISPLISLMQDQVKELKYIGEHQAAALTSMLSKQEKRFVLRHLAEYHFIFISPEMAL
QPAMLRQLQRLKLGLLVIDEAHCISQWGPDFRPEYLQLGFLRQQLQQPLTLALTATATPR
VKKDICNLLFTADEQATVIEQSVDRPNIYLAVEPAENIVKKNEKLIYLIQQLKTPGLVYF
TSRKATEKFAQLISKVTDLNAAAYHAELTQQERFAVQQQFMLGNLDVVCATSAFGMGINQ
KNVRYVIHYHLPTDLESYLQEIGRAGRDGQQSIAILLYSPEDFGRQRQLSFSNLPQPNEL
KNYQTATKQQRQYLIQNETNYQLIDFYATRGWNVERQQQLFDQRRQQKRQQLSSLETYLK
LTTCRRQFICHYFGEAGSSIQHDSKCCQLAEQPLDLDKLNLRRSNLKKSVKTNKMLSYQQ
LLKKMFLNFDSQR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgttaacaaaaagtgaattgtcagcgggtttgcagcgctattttggctatcaatctttc
aaactaggtcaaagtgacactttgatggctttaggagagcaacattgcgcggtggcaatt
cttccaacaggtactggtaaatcactttgctatcaattatatggcttgatgactaaacaa
ccagtcttggttatttcaccattgatttctttgatgcaagatcaagtcaaggaattaaag
tatattggtgaacatcaagcggctgcattgacttcaatgttatctaaacaagaaaaaaga
tttgttttgcggcatttagctgagtatcattttatttttatttcacccgagatggcttta
cagccagcaatgcttcgtcagttgcagcgtctaaagttaggtttgttagtaattgatgaa
gctcattgtatttctcaatggggtccggattttcgtccggaatatttgcaactaggtttt
ttgcgccaacaactacagcaaccactaacactagctttaacggctactgcaacaccacgg
gtaaaaaaagatatttgtaacttattatttactgcagatgagcaggctacagtaattgag
caatcagttgatcgacctaatatttatttggcagttgaaccagcggaaaatattgtcaaa
aaaaatgaaaaattgatttatttaatccaacaattaaaaacaccgggattagtttatttt
actagccgtaaagcaaccgaaaaatttgctcagctaatttcaaaagttactgatttaaat
gccgccgcctatcacgctgaactaactcaacaagaacgttttgctgttcaacagcaattc
atgttgggaaatttggatgttgtttgtgctaccagtgcttttggaatgggaattaatcaa
aaaaacgtgcggtatgttatccactaccatttaccaactgacttggaaagctatttacaa
gaaattggccgtgcgggtcgtgatggtcaacaaagcattgcaattttgttatattcaccg
gaagattttggtcggcaacggcaattaagtttttcaaatttgccccaacctaacgagttg
aaaaactatcaaacggcaactaagcaacaacggcaatatctgattcaaaatgaaacaaat
tatcagttgattgatttttatgcaactcgaggttggaatgtcgaacgacaacagcaattg
tttgatcagcgaagacagcaaaaacgtcaacagttaagcagtttggagacttacttaaaa
ctgacgacttgtcggcggcaatttatctgtcactactttggtgaagcaggcagttctatc
cagcatgatagcaaatgctgtcagttagctgaacaaccacttgatttagataaactaaat
ttgcgacgttcaaaccttaaaaagtcagttaagactaataaaatgctcagttatcagcag
ctattaaaaaaaatgtttttgaattttgattcacaacgatga
DBGET
integrated database retrieval system
