Liquorilactobacillus nagelii: BSQ50_06375
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Entry
BSQ50_06375 CDS
T06235
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSQ50_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lng03021
]
BSQ50_06375
Transcription machinery [BR:
lng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSQ50_06375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AUJ32212
UniProt:
A0A3S6QVN8
LinkDB
All DBs
Position
complement(1346544..1347665)
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AA seq
373 aa
AA seq
DB search
MAEEKMNNENAAYTKALRQTIRKFKPEKQISYDELTKKLAAPFELDSKQMEKLIQRIEDA
GISVVDEKGEPSEHSLKVASKEADKATKDRDVSAPVGVKINDPVRMYLKEIGRVDLLTAD
EEVALALRIEQGDEEAKQRLAEANLRLVVSIAKRYVGRGMSFLDLIQEGNMGLMKAVEKF
DYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQMLQDLGREPT
PEEIGAEMDMPTDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDHDATSPADHAAYEL
LKEQLESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKQLRDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagaaaatgaataatgaaaatgctgcttataccaaagctttacgacaaacg
attagaaaatttaaaccggaaaagcagattagttatgatgaattaactaaaaagttggca
gcaccatttgaacttgatagtaaacaaatggaaaaattgatccaacgaattgaagatgct
ggaatttcagttgttgatgaaaaaggggagcctagtgaacatagtttaaaggttgcttct
aaagaagctgataaagctactaaggatcgtgatgttagtgcgccagttggggttaagatt
aatgatccagtgcggatgtatctcaaagaaatcggccgagttgatttgttaacggcagat
gaagaagtagcattagctttaagaatcgaacagggtgacgaagaagctaagcagcggcta
gctgaggcaaacttacgattagtagtttcaattgccaaacgttatgttggtcgaggaatg
tcgtttctggatttaattcaagaaggaaacatgggtttgatgaaggcagttgaaaagttt
gattaccgtaaaggtttcaaattctcaacttacgctacttggtggatacggcaagcaatt
acacgtgctattgctgaccaagcacggacaattcgaattccagttcatatggtggaaacc
attaacaagttgattcgaattcagcggcaaatgttgcaagatttaggtcgagaacctacg
ccagaagaaattggcgcagaaatggatatgccgacggataaagttcgagaaattctaaag
attgctcaagagccagtttctttagaaacaccaattggcgaagaggacgattcacattta
ggtgattttattgaagatcatgatgctactagtcccgctgatcacgcagcgtacgaatta
ttaaaagaacagttggaaagtgtcttagatactttgaccgatcgagaagaaaatgtttta
cgattgcgttttggtttagatgatggtcgaactcgaactttggaagaagttggcaaggtg
tttggagttacccgtgaacgtatacggcaaattgaagctaaagctttgcgtaaattgcgt
catccttcacgctcgaagcagttacgtgattttttggaataa
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