Liquorilactobacillus nagelii: BSQ50_07275
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Entry
BSQ50_07275 CDS
T06235
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSQ50_07275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_07275
Enzymes [BR:
lng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSQ50_07275
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ50_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
DAP3
Cas3-like_C_2
SLFN-g3_helicase
Zn_ribbon_6
nSTAND_NTPase5
DUF7499
Motif
Other DBs
NCBI-ProteinID:
AUJ32379
UniProt:
A0A3Q8CFG6
LinkDB
All DBs
Position
complement(1523630..1526044)
Genome browser
AA seq
804 aa
AA seq
DB search
MQVAAVIVDVPSRQTDRPFSYLIGSELTDKVAVGMRVIVPFGRGNRLIQGFVIGITQKPA
AETSKLKKINEVQDLVPVLNAEMLALADWLAISTFSFKISCLQSMIPNGLRGKSEKKLRL
VSLEQVDPVVRKFFDGKNEQILQPSKTSAETFKKLQKARAAGKIELIYQVKDQAKPKKVR
IVSNLLTTSQAEKLKKKQRANAHQLIHLLDFLADHPQIMIQQSVLADRFEISPTAIRSAV
EKKWLKISNQVVKRTTYDPQKITATTAKNLTMDQQQVYQSIVTTIQQKTAVPFLLEGVTG
SGKTEIYLQLMAAAIEQQQAALLLVPEISLTPQMVAQVVGRFGKQVALLHSGLSIGERLD
EWRRIEDGTATIIVGARSAVFAPIKNLGIIILDEEHESSYAQDSMPRYHARDVALWRSRY
HHCPVVLGSATPALESRARAQKGVYHWLRLPQRINTRPLPTVALVDMRQAVTQSHDADFS
NELLTAIKDRLQKHEQIILLLNRRGYASFMMCRQCGFVLKCPNCDISLTLHKDQRLMKCH
YCGHEEPIPVKCPACGNSKIRFYGTGTQKIQEKLQHYFPTARILRMDVDTTRRKGAHQQI
LQRFGRHQADILLGTQMIAKGLDYPEVTLVGVLNADTSLSLPDFRASEQTFQLLTQVSGR
AGRAEKEGKVVIQTFNPQHYALQFAKTQDYEQFYAYEMHLRHQGDYPPYYFTIQLAANAV
SEQAAIKYLFKIMQELKTKLSPEAKLLGPVPQMVLRIKNQYRYHLIIKFKHEPQLMEYLH
HLLETSQRQKNVQLIIIREPMSFI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtagcagctgtaattgtcgacgttccatcaagacagactgatcgacctttttct
tatttaattggttctgaattgacagataaggttgctgttgggatgcgggtaattgttccc
tttggccgtgggaatcgtttaattcaaggttttgtaatcggaattacacaaaagccagct
gcggaaacaagtaagctaaagaaaatcaatgaagttcaggatttagttccagtattaaat
gctgaaatgttagctttggctgattggttggctatatcgactttttctttcaaaatatct
tgtttgcagtcaatgattccaaatggcttgcgtggaaaatcagaaaaaaagctgagacta
gtatcacttgaacaagttgatccagtggttcgtaaattttttgatggcaaaaatgaacag
attttgcaaccaagcaaaacttcagccgaaacctttaaaaaattacaaaaagctcgagca
gctgggaaaatagaactcatttaccaagttaaagatcaagccaagcccaaaaaagtccga
atagttagtaacttattgaccacatctcaggctgaaaaactcaaaaaaaaacagcgtgcc
aatgcgcatcaattaattcacttattggactttttagctgatcatccgcaaataatgatc
caacagtcagttttagcggatcggtttgagattagtccaactgcgattcgatcggcagta
gaaaaaaagtggctaaagatttctaatcaagtagttaaacgaaccacttatgatccgcaa
aaaattactgcgacaacagccaaaaatttaactatggaccaacaacaagtttatcaatcg
attgtaaccacgatccaacaaaaaacagcagtaccttttttattagaaggagttactggc
agtggtaaaactgaaatttatctgcagttaatggcagcagctatcgagcaacagcaagct
gcattgttactggttccagaaatttctttaacaccgcaaatggtagctcaggtagttggg
cggtttggaaaacaagtagctttattacacagtggtttatcaattggtgaacgtttagat
gagtggcggcgaattgaggatggtaccgctacgattattgttggtgcacgttcagctgtt
tttgcaccaataaaaaatttaggaattattattttagatgaagagcatgaaagcagttat
gctcaggacagtatgccccgctatcatgctcgtgatgttgcattgtggcgtagtcgctac
catcattgtccagttgttttgggtagcgcaaccccagctttagaatcgcgtgctcgggca
caaaaaggcgtctatcactggcttcgattgccacaacggatcaacactcgaccgttgcca
actgttgcgctggttgatatgcgacaggcagtaactcaaagccatgatgcggacttttca
aatgaattattaacggctatcaaggatcgtttacaaaaacacgaacaaattattctgtta
ttaaatcgccgaggatatgcttcttttatgatgtgtcggcaatgtggttttgttttgaaa
tgcccaaactgtgatatttcattaacgttgcataaggaccagcggctgatgaagtgccat
tattgtggtcatgaggagccaattccggtaaaatgtcctgcttgtggtaattcaaaaatt
cgtttttacgggacgggaacacaaaaaattcaagaaaaattacaacattattttccaaca
gctaggattttaagaatggatgttgatacgacgcgacgcaaaggtgctcaccagcaaatt
ttacagcgatttggtcgtcatcaagcagatattttgttgggaacgcaaatgattgctaag
gggcttgattacccagaagtaactttagtgggcgttttaaatgctgatacttcacttagt
ttgccggattttcgagctagtgaacaaactttccaattattgacacaggttagtggtaga
gcaggtcgagcagaaaaagaagggaaagttgttattcaaaccttcaatccacagcattat
gcgctacaatttgctaagacgcaagactatgaacaattttatgcttatgaaatgcattta
cgtcatcaaggtgattatccaccatattattttacaattcagttggcggccaatgctgtc
agcgaacaagctgcaattaagtatttatttaaaataatgcaggagctgaaaactaagcta
agtcctgaggccaaattactgggaccagttccccaaatggttttacgaattaagaatcag
taccgctatcatttaataataaagttcaaacatgaaccacaattaatggaatacttgcat
catttattggaaacaagtcaacgtcaaaaaaacgttcaattaataattattcgtgaacca
atgagttttatttaa
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