Liquorilactobacillus nagelii: BSQ50_07510
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Entry
BSQ50_07510 CDS
T06235
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSQ50_07510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_07510
Enzymes [BR:
lng01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSQ50_07510
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSQ50_07510
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSQ50_07510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
DUF7573
TtuA_LIM_N
Motif
Other DBs
NCBI-ProteinID:
AUJ32422
UniProt:
A0A3S6QW79
LinkDB
All DBs
Position
complement(1569294..1570124)
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AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLVKLIQNKTIKNVKVIYPKIITGDVGQFEQQLHGKSIQSIGRRGKFL
LFNFDQGLTMISHLRMEGKYFVKSSLDPLEKHTHVIFEFVDGSQLRYNDVRKFGRMQLIK
TQQVKEVSNLAKLGPEPLDNQFLLADFIQKLAGKKKAIKPVLLDQTVVAGLGNIYADEVL
WLSKIHPLTPANKLSPAQISLLRQQIIKELTAAVAAGGTTIRSYTDAFEHSGKFQFDLHV
YGRQGQPCQRCGTEIVKIRVAQRGTHFCPNCQRVTK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattaccagaggtagaaaccgttcgtcgcggcttagtaaaattaatacagaat
aaaacaattaaaaacgttaaagtaatttatcctaagataattactggagatgttggtcaa
tttgagcagcaattgcatggtaagtcgattcaatcaattggtcgtcgcggaaaattctta
ttatttaattttgaccaaggattaacaatgatttctcatttacgaatggaaggaaaatac
tttgtaaaatcgagccttgacccgttagaaaaacatacgcatgttatatttgaatttgtg
gatggttcgcagctacgctataatgatgttcgaaaatttggccgaatgcagttgataaaa
actcagcaagtaaaagaagtctctaacctagctaaactagggccagaacccctggataat
cagtttcttctagcggatttcattcaaaaattagcaggtaagaaaaaagcaatcaaacca
gttttgttagatcaaacagtcgttgccggactggggaatatttacgcagatgaggtgttg
tggttgagtaaaattcaccccttaacaccggccaataaattatcgcctgcgcaaatttca
cttttgcgtcaacaaataattaaagagttaacggcggcagtagcagctggtggaacaacg
attcgtagttatactgatgctttcgaacactctggtaagtttcaatttgatctgcatgtc
tatggtcgccaaggtcaaccttgtcaacgatgtggcactgaaattgttaaaatccgtgtt
gcacaacgcggtacacacttttgtcctaattgtcagcgggtgactaaatga
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