KEGG   Liquorilactobacillus nagelii: BSQ50_09945
Entry
BSQ50_09945       CDS       T06235                                 
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
lng  Liquorilactobacillus nagelii
Brite
KEGG Orthology (KO) [BR:lng00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lng02048]
    BSQ50_09945
Prokaryotic defense system [BR:lng02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    BSQ50_09945
   Subtype I-D factors
    BSQ50_09945
SSDB
Motif
Pfam: Cas_Cas6_C
Other DBs
NCBI-ProteinID: AUJ32827
UniProt: A0A3Q8CG29
LinkDB
Position
complement(2059664..2060407)
AA seq 247 aa
MRFSIELKFVSPKAKPVKLKIRYQEAFLYLLKSGLSHVDPNLFSYLYRKNTPKLFCLAAN
FPDATFYADSITLGEKNNAYWQLSTADAKLGLSFYNTLMYLYKNGPWPFGKCLKVMFGSP
FQIKEPVIVTNEIKVKTLSPLVVRKDKRLFLSGTKDANLEQFNQVLQGNMQSRFKNYYPK
EISHMIENMTYLPIKTRKTVIKTFDINIESTVGVFSLTADPVLLSLLVKNGLGIRTGSFS
GCLKVIH
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaggttttcaatagagttaaaatttgtttcacccaaggcaaaaccagttaaattaaaa
attaggtatcaagaagcatttttgtatcttttgaagtcggggttatcgcatgtagatccg
aatttattttcttatctgtatagaaaaaatacgccgaaactgttttgccttgcggctaat
tttcccgatgcaacattttatgctgactcgataactttaggtgaaaaaaataatgcttat
tggcaattaagtacagcggatgctaagttggggttgtctttttataatacattgatgtat
ctgtacaaaaacggtccatggccgtttggaaaatgtcttaaagtgatgtttggttcacca
tttcaaattaaagaacccgtaattgtgaccaatgaaataaaagtcaaaaccttatcaccg
ttggttgtaagaaaagataagcgactatttttatcaggaactaaagatgcaaatttagag
cagttcaatcaagtgttacaaggaaatatgcaaagccgttttaaaaactattatccaaaa
gaaataagtcatatgattgaaaatatgacttatttaccaataaagacccgcaaaacagtt
attaaaacttttgatataaatatcgaatcaacagtaggtgtgttctctttaactgcagat
ccagttttgctgagccttttggtgaaaaacggtttaggcattcgaacgggaagcttttca
ggctgtttaaaagttattcattaa

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