Liquorilactobacillus nagelii: BSQ50_10300
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Entry
BSQ50_10300 CDS
T06235
Name
(GenBank) hypothetical protein
KO
K03555
DNA mismatch repair protein MutS
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BSQ50_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_10300
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BSQ50_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
DUF3964
DUF8042
Motif
Other DBs
NCBI-ProteinID:
AUJ32893
UniProt:
A0A3S6QXV9
LinkDB
All DBs
Position
complement(2128888..2130555)
Genome browser
AA seq
555 aa
AA seq
DB search
MTQLQTLKNILLGKSDGVHLKKMMTPRLGVVWVFLIEVKEMSNSVLFLNPKQQPQVLPAT
EAFYKDLNLSSLFKQIQEKTGYRLEPFCFQPLRSAKEIKYRQQVFRDLQVTENFKLFADL
VNEIKQVNFSLENLQRTEPLQYRQEQFLLLLSRQEQAVKEFVQQAAQVKLLSPGLRRFLS
GLRVYMAAEPTKRLQQQLEQLHLKLTKINYRLIVKGRLVKVQKNPEQVQPMREKFFQSFN
GLFETTTAIDEPVKIDSIEHESGLNNIQAAIFRLLPKLYPNEFESLNSFYQQYLHYTIPE
LNQVCRELEFYLAWIAIEQKISQRKLSFCLPQIIQIGEEQVNDSFDFELAVKSYRKKNFK
IVTNNFDLPGNKSFLIISGPNQGGKTTYARMSGINYYLLALGVAIPGGTAMLKLRPKLLT
HFEREETADKLTGLLAADVERIHQIVTVADQQSFIILNELFSSTAAKDAAVLGKKVLNLL
QAKKAAGIYVTFLEELGQQPATVTLMSQVNQNAQRSYKIIPAPLNNQVYADLLLEKYNLT
IAAIEGGLKNESSID
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactcaattacagactttaaagaatattttgcttggaaaaagtgatggtgttcactta
aaaaagatgatgacacctaggctaggagtagtctgggtttttttaattgaggtgaaagag
atgagtaatagtgttttgtttttaaatccaaagcagcagccgcaagtgctgcctgcaaca
gaagcattctataaagacttgaatttgtcatctttgtttaaacaaattcaagaaaaaacc
ggataccgacttgaaccattttgttttcagccgttaagaagtgctaaagaaattaagtac
cgccaacaagtctttcgtgatttgcaagtaacagagaatttcaaattatttgctgatcta
gttaatgaaattaaacaggttaattttagtttagagaatttgcagcgaacagagccattg
caatatcgccaagaacaatttcttttattattatcgcgacaagagcaagcggtgaaagaa
tttgtccaacaagcagctcaggttaaattactttcaccaggtttaagacgctttttaagt
ggcctaagagtttatatggcagctgagccaactaaacgtttacagcagcaattggaacaa
ttgcatcttaagttgactaagattaactatcgtttaattgttaaaggccgtttggtaaaa
gttcaaaaaaatccagaacaggttcaaccaatgagagaaaagttttttcagagttttaat
ggtttgtttgaaacaacgacagcaattgatgaaccagtaaaaattgattcaatcgaacat
gaatcgggtttaaataatattcaagcagcaatttttagattgttgccgaaactctatccg
aatgaattcgaatctttgaacagtttttatcaacagtatttgcattatacaattcctgaa
ttaaatcaggtgtgtcgagaattggaattttacttggcttggatagcgattgaacaaaaa
attagccaacggaagttgagtttttgtttaccgcaaattatacaaataggtgaagaacag
gttaacgatagttttgattttgaattggcagtaaaaagttatcgtaagaaaaactttaaa
atagtcaccaataattttgatttgccgggaaataaatcgtttttaattatttctgggcct
aatcagggaggaaaaacaacttatgccagaatgagcggaatcaattattatttgttagcg
ttgggggtcgcaattcctgggggaacggcaatgctaaaattacggccgaaattgttaaca
cattttgagcgggaagaaacagcagataaattgaccggcttattggctgcagatgttgaa
cgaattcatcagatagtgacggtcgctgatcagcaaagctttatcattttaaatgaactg
ttttcttcaacagcagctaaagatgcagcagtattggggaaaaaggttttgaatctactg
caagccaaaaaagctgctggaatatatgtgacctttttagaggaattagggcagcaaccg
gcaactgttacattaatgagtcaagtaaatcaaaatgcccaacgcagttataaaataatc
ccagcgccgcttaacaatcaagtatacgctgatttactgcttgagaaatataatttaaca
attgctgcaattgaaggaggcttaaaaaatgaaagttcaattgattga
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