KEGG   Liquorilactobacillus nagelii: BSQ50_11070
Entry
BSQ50_11070       CDS       T06235                                 
Name
(GenBank) RNA polymerase
  KO
K02405  RNA polymerase sigma factor FliA
Organism
lng  Liquorilactobacillus nagelii
Pathway
lng02020  Two-component system
lng02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lng00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BSQ50_11070
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BSQ50_11070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lng03021]
    BSQ50_11070
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:lng02035]
    BSQ50_11070
Transcription machinery [BR:lng03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BSQ50_11070
Bacterial motility proteins [BR:lng02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BSQ50_11070
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 Clr5 GerE MenC_N
Other DBs
NCBI-ProteinID: AUJ33038
UniProt: A0A3S6QY72
LinkDB
Position
complement(2298485..2299192)
AA seq 235 aa
MYKIKLEDKVLKYLPLVERVASRITVKNSEYEYGDLYDIGVIGLIDALQKFDASKQVPFE
RYAMIRIKGAIIDEVRKHAKLSRYKMANINSFYAVKQELEQKLKREVTDREISEKMNISS
TQLNEIYENIHYLASISLESTIFPQADDFTLEDILEDTNAANGEKNLLREEEKKALIIAV
KKLNQREQLILSLYYEQNATLKEIAAILDVSIARVSQIHGKTIIKLRQLIKEEMK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgtataagataaaacttgaagataaggtattaaaatatttgccattggttgaacgggtt
gctagccgaattaccgtcaaaaattctgagtatgaatatggtgatctgtatgatatcggt
gtgatcggcttaatcgatgctttgcaaaaatttgatgctagcaagcaagttccgtttgaa
agatatgcaatgattcgaatcaaaggggcgattattgatgaggttagaaaacatgctaaa
ctttcacgttataaaatggctaatattaatagtttctatgccgtcaaacaagaactagaa
caaaaactcaaacgtgaagtaacagatcgagagattagtgagaaaatgaatatttcttca
acacaattgaatgaaatttatgaaaatattcattatttagcaagtatttcactagaaagt
acgatttttccacaagccgatgattttaccttagaggatatcttagaagatactaatgca
gcgaatggtgaaaaaaatttattacgagaagaagaaaaaaaagcgctaataatagctgta
aaaaaattgaatcagcgagagcaattaattttgagcttgtattatgaacagaatgcgact
ttaaaagaaatagcagcaattctcgatgtttcaattgcccgtgtttcacaaattcatgga
aaaacgattatcaagttacgccagctgatcaaggaggaaatgaaatga

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