Liquorilactobacillus nagelii: BSQ50_11250
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Entry
BSQ50_11250 CDS
T06235
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lng
Liquorilactobacillus nagelii
Pathway
lng03420
Nucleotide excision repair
lng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSQ50_11250
03430 Mismatch repair
BSQ50_11250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lng03400
]
BSQ50_11250
Enzymes [BR:
lng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSQ50_11250
DNA repair and recombination proteins [BR:
lng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSQ50_11250
MMR (mismatch excision repair)
Other MMR factors
BSQ50_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C
SLFN-g3_helicase
DEAD
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUJ33073
UniProt:
A0A3Q8CDC1
LinkDB
All DBs
Position
2331309..2333573
Genome browser
AA seq
754 aa
AA seq
DB search
MKNEKRIEQQRVNQVVAKIKNKLTTKTAELQQARTERSAVEKNYGQNAKINTFEIDDQME
TNAEVQQQKQLVAKNIQSEDILDQQVKTLNSLSSSPYFGRIDIHEDDEPEAETLYIGNAS
FADKKNNFLIYDWRAPVSSIYYNGTLGQVAYQTPGGKQTAQLMKKRQFRIKQGQIRQMFD
TNETVGDQLLQEMLSEHSTEYMQNIVATIQQEQNTIIRDTKHDLLLVQGVAGSGKTSAAL
QRIAFLLYHSRENLTAEQMVLFSPNRLFSNYISEVLPSLGENNLRQVTLAEFFSKRFEGL
KIENLFNSFEQQVADSNSILTQINQIKQSAEFIRVVRDYAKKLPTESLQFVPLSLAGRTI
ITQRKIRSLYQATPAAWPANLRYSETKKKLRLLLRNKIQANLNKDWVTDKLQDLSDEQIR
SMTVGLDNDPVVIEQALRQRLVTESYQPLFQAIYNDYFIDIYKQYSLFLTENDETAADLF
NQQLEFHRLTLADCAPLLILRDTLTGSGQNHQIKQLFIDEMQDYTPAQLLYLKHAFPNAH
FTLLGDSEQALYTTAQSAKKTLFDLKTALHFKHAQLVELNKSYRSSQEITLFVRQMLPVD
ESIQPFSRHGTRPEWLICDQTNWKERLLQQISNLHTEFTSIAIITQTSKTAMKLQAYLRP
QLKTTVLQSNNYKLPSGIIILPVYLAKGLEFDAVIVYDVSELEYPNKHRSILYTACSRAM
HRLTLLSIGTPAELIEQIDPTTFEKKDFTNQLLK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgaaaaaagaatcgaacaacaacgagttaaccaagttgttgccaaaattaaa
aacaaattaaccactaaaactgcagaattacaacaagctcgaactgagcgctcagcagtt
gaaaaaaactatggtcaaaatgcaaaaatcaacacttttgaaattgatgaccaaatggaa
accaatgctgaagttcaacaacaaaaacaattagtggctaaaaatatccaaagtgaagac
attttagaccagcaagttaaaactttgaattcgttaagttcatccccatactttggccgc
atcgatattcatgaagacgatgaaccagaagctgaaaccttatatatcggcaatgcttca
ttcgccgacaaaaaaaataattttttgatttatgattggcgagcacccgtttccagtatt
tattataatggtactcttggacaagttgcttaccagacacctggcggtaagcaaacagct
cagctgatgaaaaaaagacagtttcgcatcaaacagggccaaatcaggcagatgtttgat
actaatgaaacagtcggagatcaattattacaagaaatgcttagtgaacatagcacggag
tatatgcaaaatattgttgctacaattcaacaagagcaaaatacaattatccgtgataca
aaacatgatttattattggtccaaggggtcgctggcagtggaaaaacttcagctgcactc
caacgcattgcttttttactctaccatagccgtgaaaatttaacagcagaacaaatggtt
ttgttttcaccgaatcgcttgtttagcaattatatttctgaagtcttacccagtttaggg
gaaaacaatcttcgccaagtaacattagctgaattttttagtaaacgttttgagggacta
aaaattgaaaatctttttaatagttttgaacaacaagtagccgattcaaattcaatttta
actcaaattaatcagattaaacaatcagctgaattcattcgtgtagtgcgtgactacgct
aaaaagttaccaacagaatcattgcaatttgttcccttaagtttagctggcagaactatc
attacccaaagaaaaattcgttctttgtatcaagcaacaccagcagcctggccagccaac
ctacgttatagcgaaaccaagaaaaaattacgtcttttgctgcgcaataaaattcaagcc
aatttgaataaagattgggtaactgataaattgcaagatttgagtgacgaacaaattcgt
tcaatgacagtgggattagataatgatcccgtagtaatcgaacaagcattgcgccagcga
cttgtcactgaaagttatcagcctttatttcaagcaatttataatgattacttcatcgat
atctataaacagtacagcctctttttaaccgaaaatgatgaaaccgctgctgatttattt
aatcaacaactagaatttcatcgtttaactttagcagactgtgctcccttattgatactg
cgtgacacattaaccgggtctggccaaaatcatcaaattaaacaattatttatcgatgag
atgcaagattacactcctgcgcaattactttatttaaaacatgcttttccaaatgctcac
tttactttgcttggtgatagtgaacaagcactctatactactgctcaaagcgccaaaaaa
acactttttgatctaaaaacagctttacattttaaacatgctcaattggttgagttaaat
aaaagctatcgttcaagccaagaaataaccttgtttgttcgacaaatgctcccagttgac
gaaagtattcaaccttttagtcgtcatggaacacgacctgaatggctaatttgtgatcaa
actaattggaaagaaaggctattgcaacaaatctccaatctgcacactgaatttacttca
attgcgattataactcaaacaagtaaaacagcaatgaagcttcaagcttatttacgacca
caacttaaaacaactgttttgcaaagtaataattacaaattaccaagtggaattattatt
ttaccagtttacttagcaaagggattagaatttgacgctgtaatagtttacgacgtcagt
gagctagaatatcctaacaaacatcgcagtatcctctacactgcttgttcacgtgcaatg
catcgcttaacattgctaagcattggtacacccgctgaactgatagagcaaattgaccca
acaacttttgagaaaaaagacttcactaaccagttactaaaataa
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