Enterobacter sp. SGAir0187: CWR52_05475
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Entry
CWR52_05475 CDS
T05333
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lni
Enterobacter sp. SGAir0187
Pathway
lni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWR52_05475 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lni03019
]
CWR52_05475 (rhlE)
Enzymes [BR:
lni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWR52_05475 (rhlE)
Messenger RNA biogenesis [BR:
lni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWR52_05475 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AVH16684
LinkDB
All DBs
Position
complement(1132476..1133855)
Genome browser
AA seq
459 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPFIKAEPIQNGRQGGRGQGGGGRGQQPRRAEGGAPKSAGKP
PRRSNDSKPAGDNPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaaccccaatccagcagcaggctattcctgccgttcttcagggccgtgac
ctgatggccagcgcccagaccggcaccggaaaaaccgcgggctttacgctgccgctgtta
gagctgctggtaaaaaaccagccgcacgccaaaggccgtcgtccggttcgtgccttgatc
ctgactccaacccgcgaactggccgcgcagattggcgagaacgtgcgtgactatagccgc
tatctcaacattcgctcgctggtggtgttcggtggcgttagcatcaacccgcagatgatg
aagctgcgtggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctggaa
caccagaacgcggtgaagctggataacatcgaaattctggtactggacgaagccgaccgc
atgctcgacatgggctttattcacgatattcgccgcgtgctggccaagctgccgccgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtggcgcgccgtaacaccgcctctgagcaggtg
acgcaacacgttcactttgttgataaaaagcgcaagcgcgaactgctctcccagatgatc
ggccagggtaactggcagcaggtgctggtctttacccgcaccaagcacggtgccaaccac
ctggcggaacagctgaataaagacggtatccgcagcgcggcgatccacggcaacaagagc
cagggcgcgcgtacccgtgcgctggcggacttcaagtctggcgacatccgcgtgctggtg
gcaaccgacattgctgcccgtggcctcgacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagactacgtgcaccgtattggccgtaccggtcgtgcagcg
gcaaccggtgaagcgctctctctggtttgcgtggacgagcacaagctgctgcgcgatatc
gaacgtctgctgaagaaagagatcccgcgcatcgaaaccccgggctacgaagtggatccg
tttatcaaagccgagccgattcagaacggtcgccagggcggtcgcggtcagggcggcggt
ggtcgcggtcagcagccgcgccgtgccgaaggcggcgcgccgaagtcagcgggcaaaccg
ccgcgtcgtagcaacgacagcaaaccggccggtgacaatccgtggcgcagcggcgaaggc
aagccggcaggagaagggcagcgccgacgccgcccgcgcaagcctgctaacccgcagtaa
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