Enterobacter sp. SGAir0187: CWR52_07465
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Entry
CWR52_07465 CDS
T05333
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lni
Enterobacter sp. SGAir0187
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lni03400
]
CWR52_07465 (sbcC)
DNA repair and recombination proteins [BR:
lni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWR52_07465 (sbcC)
Archaeal homologous recombinant proteins
CWR52_07465 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
COG5_N
nSTAND_NTPase5
ABC_tran
cobW
AAA_21
ABC_ATPase
Meg
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AVH17046
LinkDB
All DBs
Position
1534483..1537614
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LQKVSQAQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCE
DGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVFEKHKAARSVLEKCEAQAAGVVLLSEEQQQQLQQSLQALTDEEKTLLEQQQ
NQQKDFQWLTRHDELVREQQRVTAMQQQTQQALTDAAPELAKLQLALPAAQLRPLWEHQQ
EQTARLTQTQQRIIEVNTRLQARTALRSRIRNTALRDHEQRQAELSALAQWLAEHERYRL
LGQEIAGWRAQFSQLNRDKTQLASLAARIGELRNRLTAMPENALTLTADEVSAAMEQQSR
LRTLRQQLTSLHARYQPLQKRLRQSSESVQKAQAEQSKLNETLTLRRQQYKEKNQHYQDL
KALCETEATIKKLEHYRSQLEAGKPCPLCGSCEHPAVEQYQSLELTDNQRRRDALEKEVA
ALKEEGLLLLGQVNALTQQIQRETDEVQTLSQEEQALTKEWVAACTSLNITLNIQDDIAP
WLNEQEQYERQLYQLSQRLTLQNQLSEQEAQEQQYQQQLAATRQALEHALLALSLNAPEE
GQEAAWLQAREAEFAQWQEKQTQHGVLQERINALKPLLDALPATNSEDAEPVIPDNWRAI
HDECVSLQSQLTAQQQQEALERERLQQSQTQFTAALSASCFADQDAFLAALLDDDAIRHL
EQRKQSLENQIQQAAALCGQANQQLQSHLAQRPQGLNADVPTLQSQLQQLAQQLRENTTH
QGEIRQQLKQDSDNRQHQLALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLD
NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSRLDKVFAVE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgagcctgcgcctgaaaaacctcaactccctcaagggcgagtggaaaatt
gattttaccgctgagccgtttgccagcaacgggctgtttgccatcactggcgcgaccggg
gcaggtaaaaccaccctgctcgacgccatctgtctggcgctttatcacgaaacgccgcga
ctgcagaaggtctcccaggcgcaaaacgacctgatgacgcgcgacaccgccgagtgcctg
gcggaagtggagttcgaggtaaaaggcaccgcctatcgcgccttctggagccagaaccgc
gcgcgcaaccagccggacgggaacctgcaggcgccgcgcgtggagctggcgcgctgcgaa
gatggcaaaatcctggccgacaaagtgacggataagctggagcaaaccgccgcgctcacc
gggctggactacggacgctttacccgctccatgctgctttctcaggggcagtttgctgcc
tttctcaacgccaaaccgagcgatcgcgccgagctgctggaagagctgaccggtaccgag
atctacggccagatttccgccatggtgtttgagaaacacaaagccgcccgcagcgtgctt
gaaaagtgcgaggcgcaggcggcgggcgtcgtgctgttgagcgaagaacaacagcagcag
ttacagcaaagtttgcaggcacttactgacgaagagaaaaccctgctggaacagcagcaa
aatcaacagaaagattttcagtggcttacgcgccatgatgagctcgtgcgcgagcaacag
cgcgtcaccgcaatgcagcagcagacgcaacaggcgctgacggacgctgcgcctgagctg
gcaaaactgcagcttgctctccccgccgcccagcttcggccgctttgggagcatcagcag
gagcaaaccgcgcgcctgacgcaaacccagcagcgaattatcgaagtaaatactcgctta
caggccagaaccgcgctgcgttcgcgtatccgcaataccgccctgcgtgaccacgagcag
cgacaggccgagctgtcggcgctggcgcagtggctggcggagcacgagcgctatcgtctg
ttaggccaggagattgcaggctggcgtgcccagttctcacagcttaaccgcgataaaacg
cagttagcctcgcttgctgcgcggataggtgaattacgcaacaggctgactgcgatgccg
gaaaatgcgctgacgctgacggcggatgaagtcagcgcggccatggagcagcagtcccgg
ttacgcacgctgcgccagcagctgacgtcgctgcatgcccgctatcagccgctgcaaaag
cgcctgcgccagagcagtgaaagcgtgcagaaggcgcaggccgaacaaagtaagcttaat
gaaacgctgacgctgcgccgccagcagtacaaagagaaaaaccagcactatcaggatctg
aaggccctgtgcgaaaccgaagcaacaattaagaagctggagcattaccgctcccagctt
gaggcgggcaaaccctgtccgctgtgcggttcctgcgaacatccggccgttgagcaatat
cagtcgcttgagctgacggataaccagcgccgccgtgatgccctggaaaaagaggttgcc
gcccttaaagaggaaggcctgctgctgctgggacaggtcaatgccctgactcagcagatc
cagcgcgagacagacgaagttcagacgctctctcaggaagagcaagcgctcactaaagag
tgggtggcggcctgcacgtcactgaacattactttgaatattcaggacgatatcgcgcca
tggctgaacgagcaggaacagtacgagcgccagctttatcagctcagtcagcggctgacc
ctgcagaaccagctgagcgaacaggaagcgcaggagcagcagtatcagcagcagctggcg
gccacgcggcaggcgctggagcatgccctgctcgcgctctcacttaacgcacctgaagag
ggtcaggaagccgcctggcttcaggcccgtgaagctgaattcgcgcagtggcaggagaaa
caaacgcagcacggcgtgcttcaggaacgtataaacgccctgaagccactgctcgacgcg
cttccggcaacgaacagcgaagacgccgaaccggttattcctgataactggcgcgccatc
cacgacgaatgcgtgtcgctgcaaagccagcttaccgcgcaacagcagcaggaagcgctg
gagcgagagcgcctgcagcagtcgcagacgcagttcaccgcggcgctctcggcaagctgc
tttgccgaccaggacgcgtttcttgccgccctgctggatgacgatgccattcgccatctc
gaacagcgaaagcagtcgctggaaaaccagatacagcaggccgcggcgctgtgcgggcaa
gcgaaccaacagctgcagtctcatctggcgcagaggccgcaagggctcaacgccgatgta
cccacgctgcaaagccagctgcagcagctggcacaacagcttcgcgagaacaccacgcat
cagggcgagatccgtcagcagcttaagcaggacagcgataaccggcagcaccagctggcg
ttgatgcagcaaattgaagaggccgcgcgccaggcggatgactgggggtacctgaacgcg
ctgatcggctccagcaccggcgacaagttccgtaagttcgcccaggggctgacgctggac
aatcttgtctggcttgctaaccagcagcttaaccgtctgcacgggcgttatctgctgcag
cgtaaggccagtgacgcgctggagctggaagtggtcgatacctggcaggcggatgcggtc
cgcgatacccgcactctctccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgctttccgatctggtgagtcataaaacgcggatcgattcgctgttcctggatgaaggg
ttcggcacgctcgacagtgagacgctggatacggcgctggatgcgctcgacgcgctgaac
gccaccgggaaaaccatcggcgtgatcagccacgtagaggcgatgaaagagcgtattccg
gtgcagatcaaagtgaagaagattaacgggctggggtatagcaggctggataaggtgttt
gcggtggaataa
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integrated database retrieval system
