Enterobacter sp. SGAir0187: CWR52_08725
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Entry
CWR52_08725 CDS
T05333
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lni
Enterobacter sp. SGAir0187
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lni03021
]
CWR52_08725 (rapA)
Transcription machinery [BR:
lni03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CWR52_08725 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AVH17278
LinkDB
All DBs
Position
1805192..1808098
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHDGWQLKIEDVKEENGLLAYIGTRLDTDEANVILREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQNNYRPVADAVALLL
AGKRLSNDELNTLSELIGEQDIEPLLQAANSESDNAESARKELIDMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKTQEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTAHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
VERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDQVHGDLIGYLAAPENT
DGFDDLIKSCREKHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFSM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLTRFLPPTP
VRLLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGETQIEKAAR
ALIDAARAEADEKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgtcgttgccgttgatgcgcgcatggttaccctcctcttccctgccactggtgaaaac
cgcctgtacgcccgcaatgactcccctgtaacccgcgtgatgtttaatccgggtgacacc
gtgaccagccacgacggctggcagctcaagattgaagacgtaaaagaagagaatggactg
ctcgcctacatcggcactcgcctggacaccgacgaggccaatgtcatcctgcgcgaagtg
ctgctcgacagcaagctggtgttcagcaagccgcaggaccgcctgtttgccgggcaaatc
gaccgcatggatcgcttctcgctgcgctatcgcgcgcgtaagttccagagtgaacagtac
cgcatgccgtggagcggcctgcgcggccagcgcaccagcctgatcccccaccagctcaac
attgcccatgacgtgggccgtcgccacgcgccacgtgtgctgctggcagatgaagtgggc
ctgggtaaaaccattgaagcgggtatgatcctgcatcagcaactgctttccggcgccgcc
gagcgcgtgttgatcgtggtgccagaaaccctgcagcatcagtggctggttgagatgctg
cgccgcttcaacctgcgtttctctctgttcgacgacgaacgctacgccgaagcgcagcat
gatgcggacaacccgtttgaaaccgaacagctggtgatttgctccctggacttcgtgcgc
cgcagcaagcagcgtcttgagcatctgtgcgatgccgagtgggacctgatggtggtcgac
gaagcgcaccacctggtctggagcgaagatgcgccgagccgcgaatatatggctatcgaa
cagcttgccgaacgcgtgcctggcgtcctgctgctgaccgcaacgccagaacagctgggt
ctcgaaagccacttcgcccgtctgcgcctgctcgatcccaaccgtttccacgattttgag
cagtttgtggaagaacagaataactaccgtccggtggcggatgccgtcgccctgctgctg
gcgggcaagcgtctttctaatgacgaactcaacaccctgagcgaactgatcggcgagcag
gatatcgagccgcttttgcaggctgcgaacagcgagagcgacaacgcggaatccgcgcgc
aaagagctgatcgacatgctgatggatcgccacggcaccagccgcgtgctgttccgcaac
acccgtaacggcgtgaaagggttcccgaaacgcgagctgcacaccattaaactgccgctg
ccgacgcagtatcagacggcgattaaagtctccggcattatgggcgcgcgcaaaacgcag
gaagagcgcgcccgcgacatgctttacccggaacagatctaccaggagttcgaaggcgat
accggcacctggtggaacttcgatccgcgcgtggagtggctgatgggctacctgactgca
caccgctcccagaaagtgttggtgatctgcgccaaggcggctaccgcgctgcagctggag
caggtcctgcgcgagcgcgaaggtattcgcgccgccgtgttccacgaaggcatgtccatc
gttgaacgcgaccgtgccgcggcgtggtttggcgaagaggacagcggcgcgcaggttctg
ctgtgctcggaaatcggctccgaaggccgtaatttccagtttgccagcaacctggtgatg
ttcgatctgccgtttaaccccgatctgctggagcagcgtatcggccgtctggaccgtatc
ggtcaggcccatgatattcagatccacgtgccgtatctggaaaaaacggcccagtccgtg
ctcgtgcgctggttccacgaaggtctggatgcgtttgaacatacctgcccgacgggccgc
accatttacgatcaggtgcatggcgatctgatcggttacctggccgcaccggaaaatacc
gacggctttgacgatctgattaagtcctgccgcgagaagcacgacgcgctgaaagcgcag
ctggagcagggccgcgatcgcctgctggagatccattccaacggtggcgagaaagcacag
gcgctggcagagagcatcgaagagcaggatgacgacaccagcctgattagcttctcgatg
aacctgttcgatatcgtcggtatcaaccaggacgatcgtggtgagaacctgatagtcctg
accccgtccgatcacatgctggtaccggatttccctggcctgccggaagatggctgtacg
atcaccttcgagcgtgacgtggcgctgtcccgtgaagatgcccagttcatcacctgggaa
cacccgctgatccgcaacgggctggacctgatcctctccggtgataccggcagcagcacc
atctccctgttaaagaacaaggcgctgccggtggggacgctgctgctggagctgatttac
gttgtggaagcacaggcgccgaagcagctgcagctcacccgtttcctgccgccgacgccg
gtccgtctgctgctggataaaaacggcacgaacctggccggacaggtcgagttcgaaagc
ttcaaccgacagctgagcgcagtgaaccgccatacaggcagcaagctggttaacgcggtc
cagcaggacgtgcacgcgattctgcagcagggcgaaacccagattgagaaagcggccaga
gcgctgattgatgccgcgcgcgcggaagccgacgagaaactgtctgcggagctgtcgcgt
ctggaagcgttgaaggccgtcaaccctaacatccgtgacgacgagctggcggcgatcgaa
agcaaccgtcagcaggtgctggaaagcctcaaccaggcgagctggcgtctggatgccctg
cgtcttattgttgtgacgcatcagtaa
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