Enterobacter sp. SGAir0187: CWR52_13390
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Entry
CWR52_13390 CDS
T05333
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lni
Enterobacter sp. SGAir0187
Pathway
lni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWR52_13390 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lni03019
]
CWR52_13390 (rhlB)
Enzymes [BR:
lni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWR52_13390 (rhlB)
Messenger RNA biogenesis [BR:
lni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWR52_13390 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVH18118
LinkDB
All DBs
Position
complement(2770236..2771504)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgcgctgcacccgaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgctgacgctggccggtcgcgatgttgccgggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgaacccctggcgcaggctaccggcctgaagcttggcctggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggtgtggatatcctgatcggt
accactggtcgtcttatcgattacgccaaacagaaccacattaacctcggtgcaatccag
gttgtggtgctcgatgaagctgaccgcatgtacgatctgggcttcattaaagacatccgc
tggctgttccgccgtatgcctccggccaatcagcgcctgaatatgctgttctcagcaacc
ctctcctaccgtgtgcgcgaactggcgttcgaacagatgaacaacgccgagtacgtggaa
gtggaaccggagcagaaaacgggtcaccgcattaaagaagagctcttctatccttcgaat
gaagagaagatgcgcctgctgcaaacgctgattgaagaagagtggccagatcgcgccatt
atcttcgcaaacaccaaacaccgctgtgaagacatctggggccatctggctgcagacggc
caccgtgttggcctgttaaccggcgatgtcgcgcagaaaaaacgcctgcgcattcttgaa
gaatttacccgtggcgatctcgatattctggtggccaccgacgtggcggcacgtggttta
cacattccggccgtgacgcacgtctttaactacgatctgccagacgactgtgaagactat
gtacaccgtatcggtcgtaccggtcgtgcgggcgcaagcggtcactcaattagccttgcg
tgtgaagagtatgcgctgaatcttccggccattgagacctacatcggtcactctattccg
cagagcaaatacaatccggaagcgctgttaagcgaactgccgccgcctaagcgtctaacc
cgcccacgctccggcaatggtccgcgtcgttcaggcggcgcaccgcgtaatcgtcgtcgt
tcaggttaa
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