Enterobacter sp. SGAir0187: CWR52_15335
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Entry
CWR52_15335 CDS
T05333
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lni
Enterobacter sp. SGAir0187
Pathway
lni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWR52_15335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lni03019
]
CWR52_15335
03009 Ribosome biogenesis [BR:
lni03009
]
CWR52_15335
Enzymes [BR:
lni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWR52_15335
Messenger RNA biogenesis [BR:
lni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWR52_15335
Ribosome biogenesis [BR:
lni03009
]
Prokaryotic type
rRNA helicases
CWR52_15335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVH18471
LinkDB
All DBs
Position
3160108..3162003
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgttctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggatctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgcaaccatgccggaagctatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctataacagcgcagcgctgaacggtgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtaccatgaagctgactattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggat
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaacgatcgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgcgacgcaggtgacatggaactgtaccgcattgaagtg
ggccgtgatgatggcgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcgcatcccactctaccatcgagctg
ccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgaacgt
cgtggcggtggtcgcggtttcggcggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgagcgccgcgaaagccgtggcccgcgtcgtgaa
gaaggcaccagccgccgtcgtttcggtgacgcgtaa
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