Enterobacter sp. SGAir0187: CWR52_18170
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Entry
CWR52_18170 CDS
T05333
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
lni
Enterobacter sp. SGAir0187
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lni03009
]
CWR52_18170 (srmB)
Enzymes [BR:
lni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWR52_18170 (srmB)
Ribosome biogenesis [BR:
lni03009
]
Prokaryotic type
rRNA helicases
CWR52_18170 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_30
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
AVH18977
LinkDB
All DBs
Position
complement(3725369..3726697)
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AA seq
442 aa
AA seq
DB search
MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RDQTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcatctgctcgattttccacgtaaaaaatctggcccgccgcgtatttta
atcctgacgccgacgcgtgaactggccatgcaggtggccgatcacgcgcgtgaactcgcg
gcaaatacccatctggatatcgctaccatcaccggcggcgttgcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcgacgacgggccgcctgctgcagtac
attaaagaagagaacttcgactgccgcgcggttgaaacgctgatcctcgacgaagccgac
cgtatgctggacatgggcttcgcacaggatatcgagcacattgccggggaaacgcgctgg
cgtgaccagacgatgctgttctctgccacccttgaaggggaagcgattaaagacttcgca
gagcgtctgctggaagatccggtagaagtgtcggcgacgccgtccacccgtgagcgtaag
aagatccaccagtggtactaccgcgcggacaaccttgagcacaaggtcgaattgctcaaa
cacctgctgaagcaggaagatgcgctgcgcacaatcgtgtttgtgcgtaagcgcgagcgc
gtgcacgagctggcagaaatgctgcgtaacgccgggatcaacaactgctatcttgaaggc
gagatggcgcagatcaagcgtaccgaaggcattaagcgcctgaccgatggccgcgttaac
gtgctggttgccacagacgttgccgctcgcgggatcgacatccctgacgtcagccacgtc
attaacttcgatatgccgcgcagcggcgatacctatctgcaccgtattggccgtaccggc
cgcgcgggccgcaaagggattgctatctcactggtcgaagcgcatgactacctgctgctg
cagaaaattggccgctatgttgacgagccgctgaaagcgcgggttattgatggcttgcgc
ccaaccacacgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaaaccacgcgtgaagcagcgccaccgc
gacaccaaaaatattggtaagcgccgtaagccaagctctgccgcaccagagacaaaaacg
gaagagtaa
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