Enterobacter sp. SGAir0187: CWR52_22520
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Entry
CWR52_22520 CDS
T05333
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lni
Enterobacter sp. SGAir0187
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lni03032
]
CWR52_22520 (topA)
03400 DNA repair and recombination proteins [BR:
lni03400
]
CWR52_22520 (topA)
Enzymes [BR:
lni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWR52_22520 (topA)
DNA replication proteins [BR:
lni03032
]
Prokaryotic type
DNA Topoisomerases
CWR52_22520 (topA)
DNA repair and recombination proteins [BR:
lni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWR52_22520 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AVH19778
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Position
4673288..4675885
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH
QNDKPFRPENRDQTMAAVALLEKARYQVLEREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESANQFASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELSLVDLVPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDQVASHQAEWKKVLDSFFSDFTDQLEKAEKDPEEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAFFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgtgggtcatatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccatggcataactgggac
gcacaatatgaagtgctgcccgggaaagaaaaagtcgttaacgagctcaagcagctggct
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcg
tggcacctgcgggaagtgattggtggtgatgacaaacgctacagtcgtgtagtgtttaac
gaaattacgaagaatgcgattcgtcaggcgtttgagaagccgggcgaactgaatattgac
cgtgtaaacgcccagcaggcacgtcgctttatggaccgcgttgtgggctacatggtttct
ccactgctgtggaagaagattgcccgtggcctgtccgcagggcgtgtgcaatccgttgcc
gtgcgtctggtcgttgagcgtgagcgcgaaattaaagccttcgtgccggaagagttctgg
gaagtcgatgccaatgtaaccacgccgggcggtgacgctctgccgctgcaggtaagccat
cagaacgataagcctttccgtccggaaaaccgcgaccagaccatggccgccgtggcgctg
ctggaaaaggctcgctatcaggtgctggaacgtgaagacaaaccgaccagcagcaagcct
ggtgcgccgtttatcacctccaccctgcaacaggcggcgagcacccgtctggggtatggc
gtgaagaagaccatgatgatggcccagcgcctgtatgaagcgggctacatcacttacatg
cgtaccgactccaccaacctgagtcaggacgcggtcaacatggtgcgtggctacatcagc
gacaacttcggtaaaaaatacctgccggaaagcgctaaccagtttgccagcaaagagaat
tctcaggaagcgcacgaagcgattcgtccttctgatgtctctgtgctcgctgaatcgctg
aaagatatggaagccgatgcccagaagctgtatcagcttatctggcggcagttcgtggca
tgtcagatgacaccagcacagtatgattccaccacgctgaccgtcggcgcgggtgatttc
cgtctcaaggcgcgcggtcgtattctgcgtttcgacggctggacgaaagtaatgcctgcg
ctgcgtaaaggtgatgaagaccgaacgctgccggcagtgaacaaaggggatgagctctcg
ctggttgacctcgtgccagcccagcacttcaccaagccacctgcacgcttcagtgaagca
tctctggtaaaagagctggaaaaacgcggtattggccgtccgtcgacctacgcgtcaatt
atctcgacgattcaggatcgcggttacgtccgtgttgaaaaccgtcgtttctatgcggaa
aaaatgggtgagatcgtcaccgatcgcctggaagccaacttccgcgagctgatgaactac
gatttcaccgcgcaaatggaagacagtctcgaccaggtcgccagccaccaggcggaatgg
aaaaaggtcctcgacagcttcttcagcgatttcaccgaccagcttgaaaaagcggagaaa
gaccctgaagaaggcggcatgctgcctaaccagatggtactgaccagcatcgactgccca
acctgtggccgcaagatggggatccgtactgccaccacgggcgtgttcctgggctgctcc
ggctatgcgctgtcgccaaaagagcgctgcaaaaccaccatcaacctggtgccggagaat
gaagttctcaacgtgctggaaggtgatgatgcggaaactaacgctctgcgtgccaagcgc
cgctgcaaaaaatgcggcacggcaatggacagctacctgatcgatccaaaacgcaagctg
cacgtgtgtggtaataacccaacgtgtgacgggtatgagatcgaagagggcgagttccgc
attaaaggctatgacggcccgattgtggagtgcgagaagtgtggttctgaaatgcacctg
aaaatggggcgtttcggtaagtacatggcctgcaccaacgacgaatgtaaaaacacgcgc
aaaattctgcgtaacggtgaagtggctccgccgaaggaagatccggttccgctgccagag
ctgccgtgtgagaaatccgacgcgttcttcgtgctgcgtgacggcgcggcaggtgtcttc
ctggccgccaacaccttcccgaaatcgcgtgaaacccgcgcgccgctggtggaagagctg
catcgcttccgcgatcgtctgccggagaaactgcgttatctggccgatgcgccacagcag
gatccggaaggcaacaaaaccgtggtgcggtttagccgtaaaactaagcagcagtacgtt
gcggcagagaaagagggtaaagcgaccggatggtcagccttctttgtcgatggcaaatgg
gttgaaggcaagaaataa
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