Paucilactobacillus nenjiangensis: F0161_03820
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Entry
F0161_03820 CDS
T06900
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lnn
Paucilactobacillus nenjiangensis
Pathway
lnn03420
Nucleotide excision repair
lnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0161_03820 (pcrA)
03430 Mismatch repair
F0161_03820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnn03400
]
F0161_03820 (pcrA)
Enzymes [BR:
lnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0161_03820 (pcrA)
DNA repair and recombination proteins [BR:
lnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0161_03820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
F0161_03820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Rep_Org_C
FWWh
ResIII
Neural_ProG_Cyt
Motif
Other DBs
NCBI-ProteinID:
QER68346
UniProt:
A0A5P1X3H2
LinkDB
All DBs
Position
749073..751292
Genome browser
AA seq
739 aa
AA seq
DB search
MNDRQSEAVLATEGPLLVMAGAGSGKTRVLTHRIAYLIEEKDVNPWNILAITFTNKAAKE
MRDRVGKLLPEGARDVWVSTFHALCVRILRRDIEQIGYNRAFTIAATSEQRTLIKRVCAD
LNIDTKKFDPRAIGSEISNAKNALKTPAEYEKDAASPFENIVANVYKNYQRELRANQAVD
FDDLIMLTIELFELNPETLAFYQNKFHYIHVDEYQDTNDAQYKLVNMLAQQFRNLCVVGD
ADQSIYGWRGANMENILNFEKDYPDAKTVLLNQNYRSTQTILDAANEVIQNNTIRREKDL
WTDNGKGEKISYYRGQSENDESHFVVSKIQEGIKDNHQNYNDFAILYRTNAQSRVIEETF
LKANVPYTMVGGHKFYDRKEIRDVLAYLTLMVNPADSMSFERVVNEPKRGIGASSIEKLR
LFAGDNGWSMLEASQNVLLNNGLSTRARNSLDDFGRIMTDLQKMTEFLSITELTEQILKK
TGYTAALAANPTLENQSRIENLDEFMSVTQEYDKAHPDDEVENKSDNLINFLADLQLVSA
QDDVDESAPAVTLMTLHAAKGLEFPVVFLMGLEEGIFPLSRAIMEDDELEEERRLAYVGI
TRAKTKLYLTNAYSRMLYGRHQNNQASRFIDEIDADLIKNENVNVGGGASGARQVPFAQR
NATATTYHADTTSSKVVSFNGTGADKVAWKTGDKVNHKKWGQGTVVKINGEGDDMELDIA
FPAQGIKRLLASFAPIEKG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccggcagtctgaagcggttttggcaactgaaggaccattactcgtcatggct
ggtgccggatctggcaaaacgcgggtgctgacccaccggattgcgtatttaattgaagaa
aaagatgttaatccatggaatattttagcgattacctttaccaacaaggcagctaaagaa
atgcgtgaccgggttggtaaattattacctgaaggtgcgcgtgatgtttgggtttcaacg
ttccatgcattgtgcgtccgaattttacgccgagacattgaacaaattggttataaccgt
gcctttacgattgcggccaccagtgaacaacggacgttaatcaaacgagtctgtgcggat
ttaaatattgatactaaaaagtttgatcctcgcgcaattggctcagaaatttccaacgca
aagaatgctttgaaaaccccagctgaatatgaaaaagacgctgcttcaccctttgaaaac
attgtggcgaacgtctacaaaaattaccaacgtgaattacgggcgaaccaagccgtcgac
tttgacgatttgattatgctcacgattgaattgtttgaactaaatccagaaacgttggcg
ttctaccaaaacaaattccactatatccatgtggatgaataccaagataccaatgatgct
caatacaagctggttaacatgttggcgcaacaattcagaaatctctgtgtagttggggat
gctgatcagagtatttacggttggcgtggtgccaatatggaaaatatcttgaactttgaa
aaagattatccagacgctaaaactgtgctcttaaatcaaaactatcgttcaactcaaacc
attttggatgccgcaaatgaggtcattcaaaacaacacgattcgccgtgaaaaagacttg
tggactgacaatggcaagggtgaaaaaatatcttattatcgtggccagtcagaaaatgac
gagtctcattttgtggtctcaaaaattcaagaaggtatcaaagataaccaccaaaattac
aatgattttgcgattctctaccggactaacgcccaatcacgtgtaattgaagaaaccttc
cttaaagccaatgttccatacacaatggttggtggacataagttctacgaccggaaagaa
atccgtgatgtgcttgcatatttaaccttaatggttaatcctgctgactcaatgagcttt
gagcgggtagtcaacgaacccaaacgtggtatcggtgctagcagcattgaaaaattgcgc
ttatttgccggtgacaacggatggtccatgttagaagcttctcaaaatgtcttgttaaac
aatggcctttcaactcgggcgcgtaattcactcgatgactttggccggattatgaccgac
ctccaaaaaatgactgagttcctatctattactgaactgacggaacaaatcttgaaaaag
acgggttacaccgctgctttagcggctaatcccacccttgaaaatcaatctcggattgaa
aacttggatgaattcatgtctgttactcaagaatatgataaagctcatcctgatgatgaa
gttgaaaataaatcagataatttaattaactttttagctgatttacaattagtttctgcg
caagatgatgtcgatgaatcagcaccggctgtgaccttaatgactttgcatgccgctaag
ggacttgaatttccagtcgtctttttgatgggcttggaagaaggcatttttccattatct
cgggccattatggaagatgatgaattggaagaagaacgtcgtctcgcttacgtcggaatt
actcgtgcgaagacgaaactgtatttaaccaatgcttattcacggatgctgtacggccgt
caccaaaataatcaagcttcacgcttcattgatgaaatcgatgctgatttaattaaaaat
gaaaacgtgaatgttggtggaggcgcatctggtgcgcgtcaagtgccattcgcacaacgc
aatgcaactgcaacaacctatcacgccgacaccacttcgtctaaagtggtgtcatttaat
ggcacaggcgctgacaaagtggcttggaagactggcgataaagtcaaccacaaaaagtgg
ggtcaagggacagttgttaaaatcaatggagaaggcgacgatatggaacttgatattgcc
ttcccagctcaaggtatcaaacgcctcttagctagctttgcaccgatagaaaaaggatag
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