Paucilactobacillus nenjiangensis: F0161_06060
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Entry
F0161_06060 CDS
T06900
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lnn
Paucilactobacillus nenjiangensis
Pathway
lnn03030
DNA replication
lnn03430
Mismatch repair
lnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0161_06060 (dnaE)
03430 Mismatch repair
F0161_06060 (dnaE)
03440 Homologous recombination
F0161_06060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lnn03032
]
F0161_06060 (dnaE)
03400 DNA repair and recombination proteins [BR:
lnn03400
]
F0161_06060 (dnaE)
Enzymes [BR:
lnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0161_06060 (dnaE)
DNA replication proteins [BR:
lnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0161_06060 (dnaE)
DNA repair and recombination proteins [BR:
lnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0161_06060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QER67463
UniProt:
A0A5P1X1S8
LinkDB
All DBs
Position
complement(1188600..1191965)
Genome browser
AA seq
1121 aa
AA seq
DB search
MSFVPLQVLSSYSLLKSTSQIKQLVASAKDRGYTALAITDENVLYGAFDFYNEAVKQGIK
PLIGMTIVFPSEVVADDDQRLVLIAKNYDGYRHLMKITTTIQTLERGETITLDQLSEWFH
DLFVILPTDNDLYRLIQSGQADEARVYFEQLAKSVDEQSLLIGINPSVDAILRQTMMQLV
TQLNTQLIGLSRVGYLNADDHFSVEVLRSIDRGNQMNQPQMLASQQGEHYLKPVADIERE
FQTVGLVDAVNLTQVIAGQANVKLESQDTILPKFENDKQLDSFTYLKQLCIEGLKLRAIA
PGFTVDDYRNRLASELKIIHEMGFDDYFLIVGDVIAYAHQHDIITGPGRGSAAGSLVAYS
LAITDVDPLQYNLLFERFLNPERVQMPDIDLDIPDDRREEILQYVHDKYGHGRVAQIITF
GTLATKQVLRDVGRVFGLSQFEAAEWSKTIPQALHISLEDSYRQSLPLRNLVADNAKNQL
IFETAKKLEGLPRHYSTHAAGIVLSQEKLEDLVPLQDGGDGMLMTQFAKDTVEAIGLLKI
DFLGLRNLSILDHAVKLVQQTNPEFALTQIELNDKKTLELFQNGDTNGVFQFESSGIKNV
LTQLHPETFELIVAVNALYRPGPMENIDTFIKRKKGQEPVSYPDESLKDIVGVTYGILVY
QEQVMQVASKMASFSYGEADLLRRAMSKKKQSVMDSMRSKFIHGAQDNGYTPEVAERIFD
YIDQFANYGFNRSHAVAYSKLAFELAYIKAWYPAAFLISLLNTVNNDAAKIRMYMSEAQK
HKVKVDGPNINVSEREFTMQDGHILFGLGDVKGLRRDMIRDVLESRVNDGPFTSLLNFVQ
RLDSKWQKKELIEPLVYVGAFDGLGNNRAELAEALPKIIDSVELTGSSLSLFEELQPTIS
ERKEFGLEQRLGFEEQYLGAYLSGHPVSQFADAGMRLGVTPVAELANRASVKIFVFVTNV
KVIRTKRGEQMAFVSGSDQTGSIEVTVFPNLYKRISALLEKNKILLVDGKVETERRLQVI
ANQIQDAKTVVVKSNQTKPPTVSKRWVLRIDAQHENQQTQQNLADFLVSEPGNIPVIIFE
QRTDKKLIQPKERWIPDSVGIQSRLVEILGTDNVVLQNIKK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgtaccgttacaagtcctcagtagctatagcctactgaaaagtacttcacaa
attaaacagctagtggcgagtgccaaagatcgtggctatactgctctagcaattaccgat
gaaaatgttttatacggagcctttgatttttacaatgaggccgtgaaacaaggaattaaa
ccattgattgggatgaccatcgtctttccatcagaagtagtggcagatgatgaccaacgt
ttagtcttaattgccaaaaattatgatggctatcgtcacctaatgaaaattactaccacg
attcaaaccttggaacgtggtgaaaccatcaccttggatcaattatccgaatggttccac
gatttattcgtcatcttacccacggataatgatttgtaccggttgattcaatccggtcaa
gcagatgaagcgcgggtctattttgaacaactggccaaatcagtcgatgagcaaagttta
ttaattggcattaatccaagtgttgatgcaattttacgccaaaccatgatgcagttagtg
acacaattaaacacgcaattaattggtttatcacgggtgggttatttaaatgcggacgac
catttttcggtggaagtcttacggtcgattgatcgtggtaaccaaatgaaccagccccaa
atgttagccagccagcaaggcgagcattacttaaagccagttgctgacatagaacgtgaa
ttccaaacggttgggttagtagacgcggttaatttaacccaagtcattgctggccaagcc
aacgtcaagttggaatcacaagacaccatcttacctaaatttgaaaacgacaaacagtta
gattcatttacgtacttaaagcaattgtgtattgaaggcttaaaattgagagcgattgca
ccgggcttcaccgtggatgattatcggaaccggcttgcgagtgaattaaaaattattcac
gaaatgggctttgatgattacttcttgattgtcggggatgtgattgcctatgcgcatcaa
cacgatatcattactggtcccgggcgggggtcagcggccggatcattggttgcctattcc
ttggcgataaccgacgttgatccgttgcaatataacttactcttcgaacgattcttgaat
ccagaacgggttcaaatgccagatattgatttagatattccagatgaccggcgagaagaa
attttgcaatacgttcatgataaatacggccacggacgagtcgcccaaattatcaccttt
gggactttagcgactaaacaagtgttacgtgatgtcggtcgagtcttcggtttatcgcaa
tttgaagccgctgaatggagtaagactattccacaagccttgcacattagtctggaagat
tcataccgtcaatcgttgcccttacggaacttggtggcagataacgccaagaaccagtta
atctttgagactgctaaaaagttggaaggcttaccaagacactattcgacgcatgccgcc
gggattgtgctttcgcaagaaaaactagaagacttagtgccgttacaagacggtggcgat
ggcatgctgatgactcaatttgccaaagatacggtcgaagcgattgggttgttgaaaatt
gatttcttagggttgcggaacttgtcgattctagatcatgccgtcaaattggtccaacaa
acgaatccagagtttgcattaacgcaaattgagttaaatgataaaaaaactctggagctc
tttcaaaatggcgacacaaatggagtcttccaatttgaatctagtgggattaaaaatgtc
ctcacgcaattacatcctgaaacgtttgaattgattgtggccgttaatgcgttataccgt
ccaggaccaatggaaaacattgacacgttcatcaaacggaaaaaaggtcaggaaccagtc
agctatccagatgaatcattaaaagatattgtgggtgttacgtatggcatcctcgtttat
caagaacaagtcatgcaggtggcatcgaaaatggccagctttagttatggtgaggccgat
ttactgcggcgagccatgagtaagaaaaagcaaagcgtgatggattcgatgcgcagtaaa
ttcatccatggcgcgcaagataatggttatacgccagaagtggcagaacggatttttgac
tatattgatcaatttgcaaattacggatttaaccggtcacacgcggtggcgtattcgaag
ttagcgtttgaactggcgtatatcaaagcttggtatccagctgcattcttaatttcactg
ctgaatacggtcaataatgacgctgctaaaattcggatgtacatgtcagaagcccagaaa
cataaagtcaaggttgatgggcccaatattaatgtcagtgaacgtgaatttacaatgcaa
gacgggcatattttgttcggtctgggggatgtaaagggattacgccgcgacatgattcga
gatgtacttgagagtcgggtcaacgatggtccgtttacaagtttactgaactttgtgcaa
cggttagattcaaagtggcaaaaaaaggaattaatcgaaccattagtatacgtgggagca
tttgatggactaggcaataatcgggcagagttagcagaggcactaccaaaaattattgat
agtgttgagttaaccgggtctagtctgagtttgtttgaggagttacaaccgacaatttct
gaacgaaaagaatttggtttagaacaacgattgggatttgaagaacaatatttaggtgcc
tatttgtctggtcatccggtgagtcaatttgcggacgcggggatgcgactcggggtgact
ccagtcgctgaattagctaaccgtgcaagtgtgaaaatctttgtctttgtgacaaatgtc
aaggtgattcgtactaaacgaggtgaacaaatggccttcgtgtcgggcagtgatcaaacc
gggtccatcgaagtcaccgttttccctaatctatataaacgaatcagtgctttacttgaa
aaaaataagattttactggttgatgggaaagtggagactgagcggcgcttgcaagtgatt
gctaatcagatccaagatgccaagacggtggttgttaaaagtaaccaaactaagccaccg
actgtaagcaaacgctgggtgttacgcattgatgcgcaacatgaaaatcaacaaacgcaa
caaaatttagctgactttctggtcagtgaaccaggcaatattccggtaattatttttgaa
caacgaactgacaaaaaactaattcagccgaaagagaggtggattcccgattcggtggga
attcaatctcgcctggtcgagattttaggtacagataacgttgtgttacaaaatattaaa
aaatag
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