Paucilactobacillus nenjiangensis: F0161_07605
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Entry
F0161_07605 CDS
T06900
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lnn
Paucilactobacillus nenjiangensis
Pathway
lnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F0161_07605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnn03400
]
F0161_07605
Enzymes [BR:
lnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F0161_07605
DNA repair and recombination proteins [BR:
lnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0161_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
UvrD-helicase
HHH_5
nSTAND3
AAA_22
AAA_29
AAA_16
NPHP3_N
T2SSE
TsaE
AAA
UvrD_C
AAA_12
AAA_7
Rad17
SLFN-g3_helicase
HTH_IclR
NACHT
DEAD
AAA_28
RsgA_GTPase
DUF4926
NTPase_1
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QER67735
UniProt:
A0A5P1X2V1
LinkDB
All DBs
Position
complement(1491110..1493581)
Genome browser
AA seq
823 aa
AA seq
DB search
MDNSMNLFENPSESSFFVGKVEATFFASQDNFYKVLLVKVEETSFDWHDDEVVVTGNFGE
INEETSYRFEGKLVDHPKYGQQFQSSNYHSMQPTTAEGLITFLSGDQFKGVGKKTAEKIV
DALGVGAIDKIVNDPDALTGLNLKPAIVKTLIDNLADSRGMDQIIIGLNDFGFGSSLATS
IFEKYRDETLMRIEKNPYQLARDIEGVSFKKADQVAEKLQIPADDTRRIDAGVLQVLDDV
TMQTGDTYTMAKPLLTQTVQLLEESRNVRINPKQVADRLVALASSNQIVAQDNRIYPTNL
FNAEWQIAEHLHRLNSDEDVLSDDSKIEKTILKIMKRNDIEYDESQKQAITQALKSRIFL
LTGGPGTGKTTIIQGIVTAFAELHQYSLDINAYKDTPFPILLAAPTGRAAKRMSETTGLP
ASTIHRLLGLTGREESNDINVHDLNGSLLIVDELSMVDISLFKMLLAAIPSTMQIILVGD
KDQLPSVGPGQIFHDLLDFSKLPKVELSNIYRQSEESSIIPLAHAIKLGEVPNDLTKQFK
DRSFIPCRTDQVSEVIQQIVERAKTREYSKMQVQILAPMYRGSAGINRLNSIAQNIFNQI
KNEKTKSVEYRGEEFRIGDKVLHLVNSPENNVFNGDIGTIVSIDLGVPQEKGPKTDRMVI
EFDQNEVTYTRNEWQRLTLAYSISIHKSQGSQFEMVILPMVSQYSRMLQRNLLYTAITRA
KSKLVLIGEPRAFAQAIKNEAVNRKTTLLMRLEEIFNGSVMQPMIVKPTEDVPKTQTTTE
TNEPDNESEKKSYILTINSIENGQIDPMIGMSGIKPKDFVESQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacaattcaatgaatttatttgaaaatccgagtgaatcttctttttttgtgggcaaa
gttgaggctaccttttttgccagtcaagataatttttacaaggtattgttagttaaagtt
gaagagacaagttttgattggcatgacgatgaggtggttgtcactggaaactttggtgaa
attaatgaagaaacatcttacagatttgaaggcaagctggtggatcatcctaaatatggc
caacaatttcagtctagtaattatcacagcatgcaaccaacgactgcagaaggtttaatt
acctttctatctggcgaccagttcaaaggtgttggaaagaaaactgccgaaaaaattgtt
gatgcacttggagtaggtgcaattgataaaattgttaatgatccagatgctctgactggc
ttaaacttaaagcctgccattgtaaaaactctcattgataatctggctgattcaagagga
atggatcaaataatcattggattaaatgattttggctttgggagttcgctagctacatca
atttttgaaaagtaccgtgatgagacattaatgagaattgaaaaaaatccttatcaatta
gctagggacattgagggagttagttttaaaaaagctgatcaagttgctgagaagctgcaa
attcctgctgatgatactcgaagaattgatgcgggtgtattgcaagtcttagatgatgtg
acgatgcaaacgggcgatacatatacaatggctaagccgttactcacacaaaccgttcaa
ttgttagaagaaagtcggaatgtcagaattaatcccaaacaagtggctgataggctggtt
gcattggcaagttctaaccaaattgttgcgcaagataatcgaatttatccaactaattta
tttaatgctgaatggcaaattgctgaacatttgcatcggctgaatagtgatgaagatgtc
ttgtctgatgatagtaaaatcgaaaagaccattttaaaaatcatgaaacgcaatgatatc
gagtatgatgagtctcaaaagcaggccataacgcaagcgttaaaatcgcgtatcttccta
ttaactggtggacctggtactggaaaaaccacaattattcaaggtattgtgactgcattt
gcagagttacatcagtactctttagatatcaatgcgtataaagatacgccatttccaatt
ttacttgccgcacccactggtcgtgctgccaaacgaatgagtgaaacgacgggattacct
gccagtaccattcatcggctacttggtttgactggacgtgaagaatcaaacgatattaac
gtgcatgatttaaacggatcattattgatcgtagatgagttatctatggtagacatttca
ctatttaaaatgttattagccgcaattccaagtacgatgcaaatcattcttgtaggagat
aaggatcaattaccttctgttggaccgggtcaaatattccatgatttactggatttttct
aaattaccaaaggttgaattgtccaatatttatcgacagtctgaagaatcatcgattatt
ccattggcacatgctattaaattaggtgaggttccaaatgacttaacaaaacaatttaag
gacagatcgtttattccatgtcgaacagatcaagtttctgaagttattcaacaaattgtt
gaaagggcaaaaacacgtgaatattccaaaatgcaagttcagatattggcaccaatgtat
cgaggaagtgccggtatcaatcgcttaaattcaattgcacaaaatatttttaatcaaatt
aaaaatgaaaaaactaagtcagttgaatatcggggtgaagaattccggattggagataaa
gttctccacttagtaaacagccctgaaaataatgtgttcaatggtgatattgggacaatc
gtcagtatagatttgggtgtacctcaagaaaaagggccaaaaacagatagaatggtgatt
gaatttgatcaaaatgaagtgacttataccagaaatgaatggcaacgattaacattggcg
tacagtatttcgattcataaatcacagggtagccaatttgaaatggtcatcttaccaatg
gtttcacaatatagtcgtatgctacaacgaaatttgttgtatacagcaataacgcgagct
aaaagcaaactggtgctaattggcgaaccgcgagcttttgctcaagcaattaaaaatgag
gcagtaaatcgtaaaactaccttactgatgaggctagaggaaatcttcaatggttcggtc
atgcagccaatgattgtcaaaccaacagaagatgtgcctaaaacacaaacaacaactgaa
actaatgagccagataacgagtcagaaaagaaatcatatatcttaaccattaactcgata
gaaaatggtcagattgatccaatgattggaatgagcggaatcaaacctaaagactttgtt
gagtcacaataa
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