Paucilactobacillus nenjiangensis: F0161_08210
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Entry
F0161_08210 CDS
T06900
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lnn
Paucilactobacillus nenjiangensis
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lnn03019
]
F0161_08210
03009 Ribosome biogenesis [BR:
lnn03009
]
F0161_08210
Enzymes [BR:
lnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F0161_08210
Messenger RNA biogenesis [BR:
lnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0161_08210
Ribosome biogenesis [BR:
lnn03009
]
Prokaryotic type
rRNA helicases
F0161_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QER67826
UniProt:
A0A5P1X1X9
LinkDB
All DBs
Position
complement(1585246..1586598)
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AA seq
450 aa
AA seq
DB search
MAETFKNFNFQSYVYDAISDLGFREPTPVQTKVIPLVKAGKSVIGQSQTGSGKTHAFLLP
IFDQIDASSNTVQVVITTPSRELAYQIYDAAKQIAGFGPDSLIVHNYVGGTDKARQIDQL
KRHQPQIVIGTPGRIWDLISAQSLDVHTAKQFVIDEADMTLDMGFLDQVDKIAGSLPADL
QMLVFSATIPEKLRPFLRKYMNNPVIEEIPVTSVINPDVDNWLLSTKGKSKNALIYKLIT
MGDPYLVLIFANTKTRVEEIHAYLQQQNLKVAMIHGDIKPRERKRVMRQVHNLEFQFVVA
TDLAARGIDIEGVSMVINDEIPTDLDFFIHRVGRTGRKGMNGTAVTLYEPGDDKAVVALE
QLGVKFKDKEIKNDEVVDTYDRLRRTKRKPRQEELDITMKGYVKKQKKTVKPGYKKKIKG
AIAEQAIQKRRIEQRAEFRRAKKAKKNSSR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacatttaaaaattttaattttcaatcgtatgtttatgatgcgatttctgat
ttaggatttagggaacccacgccggttcaaactaaggtaattccgcttgttaaggcgggt
aaaagtgtcattggacaatctcaaactggtagtggtaaaacccatgcctttttattgcca
attttcgatcaaattgatgcaagttcgaacacagttcaagttgtcatcacaactcccagt
agggaattagcttatcaaatttatgatgctgctaaacaaattgcaggttttggaccagac
agtttaattgtgcacaactatgttggtggaacagataaagctcgtcaaattgatcaattg
aaacgtcatcaaccacaaattgtgattggcaccccaggaagaatttgggatttaatttca
gctcaatcactagatgttcatacagctaaacaatttgtcatcgatgaggcagatatgact
cttgatatgggattcttggaccaagttgacaaaatcgctggtagtttacctgctgattta
caaatgttggtgttctccgcaactattccagaaaaattacgtccattcttgcgtaagtac
atgaataatccagtcattgaagaaataccggttacgtcagtaatcaatcctgatgttgat
aactggttactttcaactaagggtaaaagtaaaaatgcattaatttacaaattaattact
atgggtgacccatatttggtgctcatttttgctaatactaaaacacgagtggaagaaatt
cacgcctatctacaacaacaaaatttaaaagttgccatgattcatggtgacattaaacca
cgtgaacgaaaacgagtgatgcgtcaagttcataacttggaattccaatttgttgtggcg
actgatttggccgcccgcgggattgatattgaaggagtttccatggtcatcaatgatgaa
attccgactgatttagatttctttattcatcgtgttgggcgaaccggccgtaaagggatg
aacggtaccgctgtgacattgtatgaaccaggtgatgataaggcagttgtggcacttgaa
caactgggtgtgaagtttaaagataaagaaatcaaaaatgatgaagtggttgatacttat
gaccgtttacgccggaccaagcgcaagcctcgtcaagaagagttagatattaccatgaag
ggttacgtcaagaaacaaaagaagactgttaaacccggttacaagaaaaaaatcaagggt
gcaattgcagaacaagcgattcaaaagcgtcgtattgaacaacgtgctgaattccgtcga
gcaaaaaaagcaaaaaagaattcctcccgttga
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