Paucilactobacillus nenjiangensis: F0161_09025
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Entry
F0161_09025 CDS
T06900
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lnn
Paucilactobacillus nenjiangensis
Pathway
lnn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0161_09025 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnn03400
]
F0161_09025 (uvrA)
DNA repair and recombination proteins [BR:
lnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0161_09025 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0161_09025 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_21
AAA_23
AAA_22
nSTAND3
AAA_25
AAA_33
DnaJ_CXXCXGXG
AAA_18
APS_kinase
Viral_helicase1
AAA_14
SLFN-g3_helicase
NACHT
NB-ARC
DUF87
Septin
cobW
RNA_helicase
NTPase_1
PRK
DUF463
MMR_HSR1
T2SSE
MeaB
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
QER67972
UniProt:
A0A5P1X233
LinkDB
All DBs
Position
complement(1749637..1752474)
Genome browser
AA seq
945 aa
AA seq
DB search
MANDKIVIHGARAHNLKNIDVSIPKNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTEITSQSPEQMVDAVLDLPERTKLQILSPIVRDKKGGQKKNLAKAKREGFVRVQ
VDGETYDVDEVPELDKNERHNINIVVDRIVVKEGIRSRLFDSFEAALRLSDGYAVADIID
GEQIPFSESYACPVCGFTVGEMEPRLFSFNAPLGACPECEGLGMKLEVDQDLIVPDSTLT
LREGAIAPWNPISSQYYPELLLQFATQFKIDMDKPFNKLTTRQQNMVLNGHPGHTFHFHY
ENDFGGVRDVDVEFEGVLRNVERRYKETNSDFTRDQMRKYMTELTCQTCHGYRLNREALS
VKVGGIHIGEASEKPVSDEIPFFSSLKLSEQNEMIAKPILKEIRDRLSFLQNVGLDYLNL
SRSARTLSGGEAQRIRLATQIGSNLSGVMYILDEPSIGLHQRDNDRLIESLKKMRDLGNT
LIVVEHDEDTMRAADYLVDIGPGAGELGGEVMAAGTPKQVEKSRKSLTGQYLAGKKFIPV
PSERRVGNGKKITITGATENNLKNIDVDFPLGKFIAVTGVSGSGKSTLVNSILKKVLAQK
INRNSEKPGKYKSVKGVKNIEKIIDIDQSPIGRTPRSNPATYTGVFDDVRGLFAQTNEAK
LRGYQKGRFSFNVKGGRCEACKGDGILKIEMNFLPDVYVPCEVCHGKRYNSETLEVQYKG
KTIADVLDMTVAEALEFFSALPKITRKLQTIVDVGLGYVSMGQPATTLSGGEAQRMKLAS
ELHKQSTGKSFYILDEPTTGLHTEDIKRLLGVLQRLVDAGNTVLVIEHNLDVVKSADWLI
DLGPEGGAGGGTVIATGTPETIAEVPESYTGQYLKPVLERDAARN
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatgataaaattgtgattcacggagcacgagcacataatttaaaaaatattgat
gtgtcaattccaaaaaataaattagtggttgtgacaggactttcaggatctgggaaaagt
tcattagcattcgacactctgtacgcagaaggacaaagacgttatgtagaaagtctttcg
tcgtatgctcgtcaattcttgggtcaaatggataaacctgatgtggattcaattgatggt
ttgtcacccgcaatttcgattgatcaaaaaacaacgtcgaaaaatccacgttcgacggtt
ggaacggtcactgaaattaatgattacctccgcttattatgggccagagtggggactcca
atttgtcccaacgatgggactgaaattacgagtcaatcacctgagcagatggtcgatgca
gtgttagatctaccagaacgtaccaaattacaaattttatcaccaattgttcgtgataaa
aaaggtggacaaaaaaagaacttagccaaagctaaacgcgaaggttttgttcgtgtgcaa
gttgatggtgaaacttatgatgttgatgaagtgcctgaattagacaaaaatgaacgtcac
aatattaatattgtggttgatcgaattgtggtcaaagaaggaattcgttctcgcctcttt
gattcatttgaagcagcactgcgcctcagtgacggttatgcggtggccgacattatcgat
ggtgaacaaattccattttctgaatcttatgcctgcccagtttgtggctttactgtgggt
gaaatggaacccagactattttcttttaatgcgcccttgggtgcgtgtccagaatgtgaa
ggcttggggatgaaacttgaagtcgaccaagatttgattgttcctgattctactttgact
ttacgagaaggggcgattgcaccttggaacccaatctcgtcacaatattacccagaatta
ctcttacaatttgccactcaatttaaaattgacatggataagccatttaataagttaacc
acgcgtcagcaaaatatggttttaaatggtcatccaggacatactttccatttccattat
gaaaatgattttggcggcgtgcgcgatgtcgatgttgaatttgaaggtgttttgagaaac
gttgaacggcgttataaagaaactaattctgacttcactcgtgatcaaatgcgtaaatac
atgacagaattaacgtgtcaaacttgtcatggatatcgtttgaatcgtgaagcactcagt
gtcaaagttggtggaattcatattggtgaagcatcagaaaagcctgttagtgatgaaatt
ccatttttcagttcattgaaattgtccgaacaaaatgaaatgattgccaaacctatttta
aaagaaattcgagatcgactgtcattcttacaaaatgtgggattagattatttaaatttg
agtcggtccgctagaacgttatctggtggggaagcacaacgaattcgtttagccacccaa
attggttctaatttatcgggtgtgatgtatattttggatgaaccttcgattgggttgcat
caacgtgataatgatcgattaattgaatccttgaaaaaaatgcgtgatttaggcaatacg
ctaattgtggtcgaacatgatgaagatacaatgcgagcagcagactacctagtcgacatc
ggtcctggagctggtgaactgggtggagaagtgatggctgctggtactcctaaacaagtt
gaaaaatcacgtaaatctttaacgggtcaatatttggccggtaagaaatttattccagtt
ccatcagagcgacgcgttggtaatggtaaaaaaatcactattactggggctactgaaaat
aacttaaaaaatatcgatgttgattttcctttaggcaaattcattgccgttactggagta
tctggttctggtaaatcgactttagttaattcaattttgaaaaaagtattagcgcaaaaa
attaaccgtaattctgaaaaaccgggtaagtataagtcagtcaagggtgttaaaaatatt
gagaagattatcgatattgaccaatcaccaattggccggacgcctcggagtaaccccgca
acttatactggagtatttgatgacgtgcgtggattatttgctcaaactaatgaggccaag
ttacgtggttatcaaaaaggtcggttcagttttaacgtgaagggtggacgttgtgaagca
tgtaaaggcgatggaattctcaagattgagatgaattttttgccagacgtgtatgtacca
tgtgaggtctgtcatggtaaacgttacaactctgaaacgttagaggttcagtataaaggt
aagacaattgctgatgtgctagacatgactgtagcggaagcattggaattctttagtgca
ttgccaaaaattacacgtaaattgcaaactatcgtggatgttggtcttggttatgtcagc
atggggcaaccagccaccactttatctggtggtgaagctcaacggatgaaattagcttca
gaattgcacaagcaatcaactggtaaaagtttctatattttggatgaaccaacaactggc
ttacacacagaagacatcaagcgattattgggcgtgctacagcgtttagtagatgctggt
aacacggtcttagtcattgaacacaatttggatgtggttaaatcagctgattggctcatt
gacttaggcccagaaggtggcgctggcggtggaactgtgattgccactgggaccccagaa
accattgcagaagtaccagaaagttatacaggtcaatatttaaaaccagttctggaacga
gatgcagctcgaaactag
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