Paucilactobacillus nenjiangensis: F0161_09185
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Entry
F0161_09185 CDS
T06900
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lnn
Paucilactobacillus nenjiangensis
Pathway
lnn03030
DNA replication
lnn03430
Mismatch repair
lnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0161_09185 (holB)
03430 Mismatch repair
F0161_09185 (holB)
03440 Homologous recombination
F0161_09185 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lnn03032
]
F0161_09185 (holB)
03400 DNA repair and recombination proteins [BR:
lnn03400
]
F0161_09185 (holB)
Enzymes [BR:
lnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0161_09185 (holB)
DNA replication proteins [BR:
lnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0161_09185 (holB)
DNA repair and recombination proteins [BR:
lnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0161_09185 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Lipoprotein_Ltp
DUF5856
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
QER68417
UniProt:
A0A5P1X816
LinkDB
All DBs
Position
complement(1787369..1788370)
Genome browser
AA seq
333 aa
AA seq
DB search
MTILDQLEQSQPQIVTRFKKIIENNELAHAYLFAGPSGAGKFQLAQWIAMRLFCLHVENN
QPDETCEECQRILSGNHPDIVEVEPDGRQIKVDQVRYLKSEFSKSAVEGSIKIFMIKQAD
KMTVNAANSLLKFLEEPEGDFIAFLMTANKSSILPTIQSRSQSVEFLPISKTRLIELLQK
DGITKSQAQFASGLTNSIDQIKLWLEDDWLDKAQKAVIDWYVLLGNHDLQSFIAVQKEMM
PLAKERDRQQTMLDMIMLIWRDTIIEANQRDTGEISYQAATVQIEQVVGKTATKKITNIA
QLTLELRRKLDQNISFQNIVEQLTIKILDTLRG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcttgatcagttggagcaatcgcaaccacagattgtgacccgatttaagaaa
attattgagaataatgaattggcgcatgcgtatttatttgcaggtccttcaggagcaggt
aagtttcagcttgcccagtggattgcgatgcgtttattttgtttacatgtagaaaataat
cagcctgacgaaacttgcgaagagtgtcaacgaattttatccgggaatcatccagatatt
gtcgaagttgaacccgatggtcgtcaaatcaaagttgatcaagttcggtatttaaagtcc
gaattttctaaaagtgctgtcgaaggctcaatcaaaatttttatgattaagcaagctgat
aagatgaccgtcaatgctgccaatagtttattgaagtttctggaagaacccgaaggcgat
tttattgcctttttgatgactgccaacaaaagctcaattttaccgacgattcaatcacgc
agtcaaagtgttgagtttcttcctattagtaagactaggttaattgaattacttcaaaaa
gatggtattactaagtcacaagcccaatttgcttcaggattgactaattcaattgatcaa
attaagttgtggcttgaagatgattggctcgataaagcccaaaaagccgtgattgattgg
tatgtgttactaggaaatcatgatttgcaaagctttattgccgttcaaaaagaaatgatg
cctctcgctaaggaacgtgaccggcaacaaaccatgttggatatgattatgttaatttgg
cgtgatacaatcattgaagcgaaccaacgagatactggcgaaattagttatcaagctgct
acagttcagattgaacaagttgttggtaaaacagcgacgaaaaaaattaccaatatcgcg
cagttaactttggaactgcgccggaagctagatcaaaatattagctttcaaaatatagta
gaacaattaacgattaagatattagatacactacgtggctaa
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