Leptospira noguchii: MAL08_01265
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Entry
MAL08_01265 CDS
T08353
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lno
Leptospira noguchii
Brite
KEGG Orthology (KO) [BR:
lno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lno03009
]
MAL08_01265 (rlmD)
Enzymes [BR:
lno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MAL08_01265 (rlmD)
Ribosome biogenesis [BR:
lno03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MAL08_01265 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
N6_N4_Mtase
Methyltransf_25
TehB
Methyltransf_4
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
UOG38036
LinkDB
All DBs
Position
1:287387..288568
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AA seq
393 aa
AA seq
DB search
MKPPANQSCQHYPECAGCDRLHIGYEKQLQHKQEEIEKRFGGFKGLEIRQIIKSPKDQMY
RHKVQLPFGHRKIGKKSVLTLGLHNKENTFIIDQKECKIQDEDLTIVAAAIRHWARNENL
EPYHEKKGSGLLRHIVLRKANASQEIIVGIVTNESEILGRKKLTDRLYSYIQQFLYKENS
KAEVVGILQNINRKNTKVVLGEKEVTWYGRHFVKEKIGKLDFQIGLSTFFQINPFQIENL
YNLILEDLPENKNVVDAYCGIGTISLYISSKSKKVIGLEENSNSIRSAIGAAKANEVENV
HFIKGKVLDTLQTALNENSDVVVLDPPREGLDADTKKILLNSKVSRILYVSCNPETLLRD
AIELTKSFKYEKMTPVDLFPHTSHLESVSVFTK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcctgcgaatcagtcttgtcaacattatccggaatgtgccggttgtgatcga
ttgcatatcggttacgaaaaacaacttcaacataaacaagaagaaatcgaaaaaagattc
ggaggttttaaagggctggaaattcgacagatcataaaaagtccaaaggatcaaatgtat
cgtcataaggttcaacttccttttggacatcgtaagataggaaaaaaatctgtactgact
cttggtcttcataataaagaaaatacgtttatcattgatcagaaagaatgtaaaattcaa
gatgaagatttgactatcgtggctgctgcgattcgtcattgggcacgaaacgaaaattta
gaaccgtatcatgaaaaaaaaggaagtggacttttaagacatatcgttcttagaaaagcg
aacgcttctcaagaaattattgtaggaattgtcaccaatgaaagcgaaattctaggaaga
aaaaaactcacagacagattatattcgtatattcaacaatttttatataaagaaaattca
aaagcggaagtagtagggatattacaaaatattaatcgtaaaaacactaaagtggttttg
ggagaaaaagaagtcacttggtatggaagacattttgtaaaagaaaaaatcggtaaactt
gattttcagattgggctttccacattttttcaaatcaatccgtttcagatagaaaattta
tacaatcttattttagaagatcttccggagaataagaacgtagtagacgcttattgtgga
attggtacaatttcattatatatctcgtctaaatctaaaaaggtgatcgggctcgaagaa
aattcgaattcgatccgttctgcaattggcgctgcaaaagcgaacgaagttgaaaacgtc
cattttattaaaggaaaggttttagatactctacaaacggctttaaatgaaaattcggat
gtggtggttttggatccaccgagagaaggacttgacgcagatactaaaaaaatattatta
aattctaaagtaagtagaattctttacgtttcttgtaatcctgaaactcttctgagagat
gcgattgaacttacaaaaagttttaaatacgaaaagatgactcctgtggatttatttcct
catacaagccatttggaaagtgtttccgtttttacaaaatga
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