Leptospira noguchii: MAL08_01955
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Entry
MAL08_01955 CDS
T08353
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lno
Leptospira noguchii
Pathway
lno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAL08_01955 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lno03400
]
MAL08_01955 (uvrB)
DNA repair and recombination proteins [BR:
lno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAL08_01955 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MAL08_01955 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_7
SWI2_SNF2
AAA_33
Microtub_bd
AAA_16
AAA_22
AAA
nSTAND_NTPase5
UB2H
AAA_14
TsaE
Motif
Other DBs
NCBI-ProteinID:
UOG39419
LinkDB
All DBs
Position
1:458847..460847
Genome browser
AA seq
666 aa
AA seq
DB search
MASIFKIHSAYKPAGDQVKAIQSIADSFQKGEKKVTLVGVTGSGKTFTMAQVIQNLGLPT
LVLSHNKTLAAQLFREFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEEID
KLRLRATSSLLEREDVVIVSSVSCIYGLGSPEEYTNSVVALKVGDTIERDAVIRKLLHIQ
YNRNDLDFSRGNFRVRGDSIEIYPAYHTDGIRIEFFGDEIDSISRINPVTAQTIFKLEKA
YIYPAKHFITSGPKVKEAVENIRAEVEAQTDFFRKNNKLLEAERILSRTNYDLEMLQEMG
YCNGIENYSRHLTGRKPGERPACLIDYFQGEFLLIVDESHVTIPQIGGMFAGDKARKQTL
VDFGFRLPSALDNRPLNFQEFEILTPRTLYVSATPAEYEIKKSPKIVEQIIRPTGLLDPI
VEIRPTKNQIEDLLVEIRKRIDAGERVLVTTLTKKMSEDLTDYYEEIGLKVAYLHSEVET
LDRVGIIRDLRKGIYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRNYKSLIQTIGRA
ARNVNGTAILYADKTTDSMTKAIEETRRRRKIQEDHNLKFGITPLTIKKEVGDIIEREEK
ERTSEDLVLEDVEKKFNSKKFPNKEVLKEKLREEMMKAAKELDFERAAILRDKMLSIQTE
DPSAKN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatttttaaaattcattccgcatacaaacccgctggggatcaagtcaaagcg
atccaaagtattgccgattcttttcaaaagggagaaaagaaggtgactttggtaggtgta
accggttccggtaaaacctttacgatggctcaggttattcaaaatctggggcttcctact
ttggttttatcgcataacaaaactttggcggctcaattatttcgagagtttaaggagttt
tttcccgaaaacgcagtggaatattttgtttcttattacgattattatcaaccggaggcg
tatgttccttcttcggatacttttatcgaaaaggatagttccatcaacgaagagatagat
aaacttagattgagagctacttcttctttgttggaaagggaagacgtggttatcgttagt
tccgtttcttgtatttacggtttgggttctccggaggaatatacaaactctgttgtagct
ttaaaagtgggcgatacaattgaaagggacgctgtaattcgcaagttgttacacatacaa
tataatcggaacgatttggatttttcgaggggaaattttcgagttcgaggggattctatc
gaaatttatcctgcgtatcataccgacggaatcagaattgaattttttggggacgaaatt
gattcgatcagtagaatcaatccagttaccgcacaaacaatttttaaattagaaaaagct
tatatttatccagcaaaacactttattacttctggtccaaaggttaaagaagcggtcgaa
aacataagggcggaagtggaagcccagactgatttttttagaaaaaacaataaacttctg
gaagcggagaggatcttatctcgtacgaattacgatttggaaatgcttcaggaaatggga
tattgcaacgggatagaaaattattccaggcatcttactggaagaaagcctggggaacgt
ccagcttgtttgattgattattttcaaggagagttccttttgattgtggacgaatctcat
gtaacgattccacagattggaggaatgttcgctggagataaagcccgcaaacagacgtta
gttgactttggttttagacttccaagtgctctggataacagacctcttaattttcaagag
ttcgaaattttaactcctagaaccctttatgtttctgcaactcccgctgaatacgaaatt
aaaaagagtcctaagattgtggagcagatcattcgaccgaccggacttttggatccgatt
gtggaaatacgtcctactaaaaatcaaatcgaagatcttcttgtggaaattcgtaagcga
atagacgcgggagaaagggttcttgttactactctcacaaaaaaaatgtcggaagatctt
accgattattacgaagagattggtttaaaagtggcttatctacattctgaggtggaaacc
ttggatcgtgttgggatcattcgagatttaagaaagggaatttacgacgttctgatcggg
atcaatcttttacgggaaggtctggatattccagaagtgtctttggttgctattttggac
gcggataaagagggttttttaagaaattataaatctctaatacagacaattggtcgtgct
gcgagaaacgtaaatggaacggcgattctttacgcggataaaacaaccgattctatgaca
aaagcgatcgaagaaaccagacgtcgtagaaagatccaggaagatcataatctcaagttc
ggtataactcctctgaccatcaaaaaggaagtaggagatattatcgaaagagaagagaag
gaacggacttcagaggatctggttctggaagacgtggagaaaaaatttaattctaaaaaa
tttccgaacaaggaagtgttgaaagaaaaacttcgtgaagagatgatgaaagcggctaag
gagcttgattttgaaagagccgcaattttgagggataaaatgttatcgattcaaacggaa
gatccttcagctaaaaattaa
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