Leptospira noguchii: MAL08_04745
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Entry
MAL08_04745 CDS
T08353
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lno
Leptospira noguchii
Pathway
lno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAL08_04745 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lno03021
]
MAL08_04745 (rho)
03019 Messenger RNA biogenesis [BR:
lno03019
]
MAL08_04745 (rho)
Transcription machinery [BR:
lno03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MAL08_04745 (rho)
Messenger RNA biogenesis [BR:
lno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MAL08_04745 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_22
OB_RNB
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UOG38626
LinkDB
All DBs
Position
1:complement(1072309..1073760)
Genome browser
AA seq
483 aa
AA seq
DB search
MATARRDNKNRHQHSNHNHNNQNDSGDSFAEEGASQESQEFDSSENSDPRSRKRKRGGGY
EGPAPAPIDLVELKKKAIADLIEVAKGLGVENTGGLKKQNLIFAILQAQAERDGQVHAAG
VMEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVEGQIRPPKESERFFAM
LRVETVNGYTPDVAGKRALFDNLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALI
VAPPRTGKTILMQNIANAITYNHPECSLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPA
QRHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGGVDSNALHK
PKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMEIHLDRKLSDKRIFP
AIDINKSGTRKEELLITKDVLQKVFVLRKVLSPMSITESMELLLEKMRLSKTNDAFLASM
NTQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaagacgagacaataaaaacagacaccaacattccaaccacaatcataac
aaccaaaacgactccggagattctttcgcagaagaaggcgcaagccaagaatctcaagag
tttgattcctccgaaaattcggatcccagatctcgtaaacgcaaacgaggaggaggctac
gaaggtcctgcacctgcgcccatcgatcttgtagaactcaagaaaaaagcgatcgccgat
ttgatcgaagtcgctaaaggtctaggagtagaaaacactggcggcttaaaaaaacagaat
ttaatcttcgccattctacaagcgcaagcagaaagagacggacaggttcacgctgcggga
gttatggaaaaacttccggatggatacggatttttacgttctccggattataactacgtc
cctggtccagacgatatttatgtttctccatctcagatcaaattgttcggtcttagaact
ggagatacagtagaaggtcaaatccgtccgcctaaagaatcggaacgattttttgcaatg
cttcgagtggaaacagtcaacggttatactccagacgtagccggcaaacgcgccttattc
gacaacttaactcctctttatccaaacgaaaggctcaagatggaatacgatccttctatg
ctcgatactagaatcctagatttgatgtgtccgattggaaaaggacaaagagccttgatc
gtagcacctcctagaaccggtaaaacaattctaatgcagaatatcgcaaacgcgattaca
tacaatcatccggaatgttctttaattgtattactaatcgacgaacgtcccgaagaagtg
acagacatggcccgtcacgttcgtggagaagtagtttcttccacatttgatgaacctgca
caaagacacgttcaggtcgcggagatggtcatcgaaaaagcaaaacgtctcgtagaacac
ggaaaagacgtagtcattcttttagattcaatcactcgtttggctcgggcctacaaccaa
gtcattcctacttccggtaaaattctttctggtggagtggactccaacgcacttcataaa
ccaaaacgattttttggagccgcaagaaatattgaggaaggaggttctcttacgatcatc
gccactgccttgatagatactggatctaaaatggacgaggtgatctttgaagaattcaaa
ggaactggaaatatggaaatccatctggatcggaagctttctgataaacggatcttccct
gcgatcgacatcaataagtctggaacccgcaaggaagaactattgattaccaaagacgtt
cttcagaaagtgtttgttctgcgaaaagtactttctcctatgagtatcacggaaagcatg
gaattattactggaaaaaatgaggctttctaaaacaaacgacgcctttttagccagtatg
aacacacagtaa
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