Leptospira noguchii: MAL08_14465
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Entry
MAL08_14465 CDS
T08353
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lno
Leptospira noguchii
Pathway
lno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAL08_14465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lno03019
]
MAL08_14465
Enzymes [BR:
lno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAL08_14465
Messenger RNA biogenesis [BR:
lno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAL08_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UOG37250
LinkDB
All DBs
Position
1:complement(3360413..3362035)
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AA seq
540 aa
AA seq
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MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVI
HAILTKGIQGVAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEG
LNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTL
LYSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEKISYMTNLIVNSK
EEGQGIIFTNYKANIPKIVYTLRKYGIPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESDYVELEKIEKY
LKQKIEILEVNEEYIQFPAGDFQSFIGGDSYDREKETHFKQSGRRPHDRNDRAPHKHDRD
RKKDKRHTSHIHSTEKDSHKKKPAAAIQEAELFLQKADSVLSSEPKGKKSGKDQHKFQNK
DKQRPGRGPQNGRNQNKNQQSGKQYDKNKRNLFDINDTGKQDTKKKKVSIWQKIKSIFGD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgaagaactatccattcatccaaaattactttctgccattcaagaaatcgga
tatacggaactaactccgatccaagagaaatcgatcccacatggattggaaggaaaggac
attaccggacttgcacaaactggaaccggaaagaccgtcgcatttttaattccggtcatt
cacgccattcttaccaaaggaatacaaggagttgcagcgctcgtattggctcccacaaga
gaacttacgatgcagatcgcggaagaagcaaaaaaattactcaaacattccgaaggaatc
cgatcagtcccgatcataggaggaaccgattacaaatcccagaacaaggatttagaagga
ttaaacggaattattgtagccactcccggaagattgatcgatatgattaaatctggttcc
atcgatatatcgaacgtagaatttttcgtactcgatgaagcggatagaatgttggatatg
ggatttatccaagatattcgttggcttttacataagtgtaagaatcgaaagcagacttta
ttgtattccgctactttgtccgtggaagtgatgagactcgcgtatcgttttttaaacgaa
cccgtagaaattcaaatcaacccagaaaaaatcatcaccgaaagaattgaccagaaaatt
gtacatttgggaagagaagaaaaaatttcctacatgaccaacttaatcgtaaattcaaaa
gaagaaggtcaaggaatcatattcacaaattataaagcaaatattccaaaaattgtatat
actctccgtaaatacgggattcccgtcactggaatatcttccgagttagatcagaaaaaa
aggcttagacttctacgggattttaaatccggaaaatatagatatatggtcgcaaccgac
gttgcttccagagggattgacgtagaaaatatagacatcgtttataattacgatcttcct
caagacacagaaaactacgtacatcgaattggtagaaccgcaagggcgggaagaaaagga
aaagcgattggtttttgttccgaatccgattacgtggaactagaaaagatagaaaaatat
ctaaaacaaaagatcgaaattttagaagttaacgaagaatacattcaatttcctgcaggt
gattttcaatcttttatcggaggagattcctacgatcgggaaaaagaaacccattttaaa
caaagcgggagacgccctcacgatagaaacgatcgtgctcctcacaaacacgacagggat
cgcaaaaaggacaaacgacatacgagtcatatacattctaccgaaaaagattctcacaag
aaaaaaccggctgctgcaattcaagaggcagaactatttttacaaaaggcggattccgtt
ttatcttcggaaccgaaaggaaaaaaatccggaaaagaccaacataaatttcagaacaaa
gacaaacaacgcccgggacgcggcccacagaatggtcgaaatcagaataaaaatcaacag
tccggtaaacaatacgataaaaacaaacggaatctatttgatataaatgatacgggaaaa
caagatactaaaaagaaaaaggtttcgatttggcaaaaaatcaaatctatctttggggac
taa
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