Leptospira noguchii: MAL08_16200
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Entry
MAL08_16200 CDS
T08353
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lno
Leptospira noguchii
Pathway
lno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAL08_16200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lno03019
]
MAL08_16200
03009 Ribosome biogenesis [BR:
lno03009
]
MAL08_16200
Enzymes [BR:
lno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAL08_16200
Messenger RNA biogenesis [BR:
lno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAL08_16200
Ribosome biogenesis [BR:
lno03009
]
Prokaryotic type
rRNA helicases
MAL08_16200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
Cas3-like_C_2
Glyco_hydro_2_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOG37550
LinkDB
All DBs
Position
1:complement(3844883..3846424)
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AA seq
513 aa
AA seq
DB search
MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPIILKGKDIIGHAQTGTGKTAAFAI
PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPIYGGQEIERQFRAL
RKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTSPDRQ
TVMFSATMTEDILTLMKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEY
RNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRKGSIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKKIER
INGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDAGHIGTYVNQVEKLMGDDYTALDIAA
ALFKMTILKDSVTFDDSVKFESDFKYEEKNSSKKKSGGGRYRDRNFGRSGSGSRPKSNSN
SHFDNNSKDGSRSKFSKGDKKQGGATSFKKKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcaagtttagcgaactaaacttatccgctgaaatccaaaacgcaatttta
gaaatgggttttgaagaagcctcgccgatccagtcagaagcaattccgattatattaaaa
ggaaaagatattatcggacacgctcaaaccggtactggtaaaaccgcagcctttgcaatt
cctacgatcgaacttctcgaagtagaaagtaaacatttacaagcattgatcctctgtcct
actcgggaattggtgatacaagtcagcgaacaatttcgtaaattgatgaaatacaaaggc
aactttgaagttgttccaatttacggaggccaagagattgaaagacaattcagggcgctt
cgcaaaaatcctcagatcgtaattgcaactccgggtagaatgatggaccacatgagaaga
ggttctatccatctcgacgagatcaaaatcgtagttttagacgaagccgacgaaatgtta
gacatgggttttcgagaagatatggaatttatcctaaaagatacatccccagatcgtcag
acggtcatgttctccgccacgatgacggaagacatacttactttgatgaagaagtttcaa
aatcaccctcaaatcatagacgttactcatcagaaattgagcgctcctaaaattgaacag
atctactacgaaattcaggaaaacgcaaaaggagaagcgcttgcgagattgattgaatat
agaaacgtaaaactagcattagtattttgtaatacaaaagcacaagtagatacggtcgta
gaacttttgaagtccagaggttactttgcggaagcgctccacggagatttaaaccaaaaa
caaagagacaaggtaatgaacggttttaggaaaggaagtatcgaaattttagtcgcaacc
gacgtggctggaagaggaatcgacgtcaacaacgtagaagcagtttttaactacgacctt
cccagagacggagaagattacgttcacagaattggtagaaccggaagagccggtaaaaaa
ggaatcgctttttcttttatcgtaggaaaacaaatctacaacttgaaaaaaatagaacgt
atcaacggaattaaaatcgaagccggtaaaattccaacgttagacgatctagaagaaaca
aaaattcattcttatacttctaaagtaagatccatcgtagacgcgggtcatattggcaca
tacgtaaaccaagtagaaaaattgatgggagacgattacacggctctcgatatagccgcc
gccttgtttaaaatgacaattttaaaagatagtgttacctttgacgattccgttaaattt
gaatctgattttaaatacgaagaaaaaaattcctctaaaaagaaatccggcggcggaaga
tacagagaccgaaatttcggtagatccggttctggttctagacccaaatcaaattcgaat
tctcattttgacaataattccaaagacggctctcgttctaaattctccaaaggagataaa
aaacaaggtggagcaacttctttcaaaaaaaagaaaaagtaa
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